Gene Caci_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1785 
Symbol 
ID8333128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2021224 
End bp2021991 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content73% 
IMG OID644954935 
Productlow-co2 inducible protein lcib 
Protein accessionYP_003112547 
Protein GI256390983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGA TGAGCAGCAC CTCCACACCT GCCTCGAAGG TTCTCCGCAC CACGTTCCCG 
ACCGCCGTCC CGGCGACCGG CTTCGTGCGC GCCACGCGCG AGCTGCTCGC GCCCCACGGC
TTCCACGCGG CGAACACGCT CCCGCTGATC GCGACCTGCC GCGACGAGTT GGCGGTGACC
ATCACGGCCC GGCTGCAGGA CGCCTGGGGC GCCGGGTTCA ACATGGCCGG GCTGGCCGGG
ATGATCGTCC TGGGCCGCAC CGGCGTGCTG GCCGCCTCGG GCCACGCCCC GGTCGAGGAC
GGCGTCCGCC GCTTCGTCCT GGTCGCCCTG CCGCACATCG GCATCGACGC CCAGGGCGTG
ATCGGCAACG TCGACCGCCC CGGCGTCCCC GGCGTCTCGC ACACCTGCGG CGCGCTGATG
GCGCTGCACG ACGAGCTGCG CGGCGACAAC GCCCCGACCG GCGACTACCC CTTCCTGGAC
GTGGCCGACC CGGAGCAGGG CATGCTCCGG GACCGCATCC CGCCGTTCCT GCCGGACGGT
CCGCTGCCGG ACCTGGCCGG GCTCACCCGG ATCGCCCGCG ACGTGATCAC CGCGGACACG
GAGAAGGTGA TCACCGTGCT GCGCGAGGGG CAGCCGCAGC CGGCGCAGGT GGCGGTGTTC
ACCGGGATCC ACATCAACGG TCCCGGCGGG ACCGAGTACG TCGAGCCCGG CAGGTGCTAC
CTGGACCTGG CGCCCGACCA GCCGGAGATC GAGCTGTCCT TCGACTGA
 
Protein sequence
MDEMSSTSTP ASKVLRTTFP TAVPATGFVR ATRELLAPHG FHAANTLPLI ATCRDELAVT 
ITARLQDAWG AGFNMAGLAG MIVLGRTGVL AASGHAPVED GVRRFVLVAL PHIGIDAQGV
IGNVDRPGVP GVSHTCGALM ALHDELRGDN APTGDYPFLD VADPEQGMLR DRIPPFLPDG
PLPDLAGLTR IARDVITADT EKVITVLREG QPQPAQVAVF TGIHINGPGG TEYVEPGRCY
LDLAPDQPEI ELSFD