Gene Caci_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1781 
Symbol 
ID8333124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2017114 
End bp2018301 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content75% 
IMG OID644954931 
Producthypothetical protein 
Protein accessionYP_003112543 
Protein GI256390979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.263848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGAGC TCCGCGTCAT GGCCGTCACC AGCGACGGTC AGCGACTTGT GCTGCGCTCT 
AACGACGGCC AGGAATTCCA TCTGACCATC GACGAGCGTC TGCGGGCCGC CGTGCGCGGC
GATCGGGCCC GGCTGGGCCA GATCGAGATA GAGGCTGAGG GACAGCTCCG CCCGCGGGAC
ATCCAGGCCC GTATTCGCGC GGGCGCGACC GCGCAGGAGG TCGCCGACGC CTGCGGCATC
TCCGTGGAGC GTATCCGCCG GTTCGAGGGA CCGATCCTCG CCGAGCGCGC CTTCATGGCG
GAGAAGGCTC AGAACACCCA GGTTCGCCGC CAGGGCGAGA ACCACGGGCA AAAGCTCGGG
GAGATCGTCG CCGAGCGGCT GGCCAAGCGC GGCGCCGAGG ACCCCGCCGC GGTGCGCTGG
GACTCCTGGC GCCGCGACGA CGGCACGTGG ACCGTGCAGG CCGTGTACAA GATCTCCGGC
GAGACGTACG AGGCGCTGTG GGGCTTCGAC CCGCCGCGCC GGCTGGTGAC GCCCGAGGAC
GACGAGGCGC GCCTGCTGTC CTCCGACGCC GCCGCGATCG CCGCCGCCGA GCCGATGTTC
CCCTTCGTCG CCGCCTCCGT GCTCTCCGGC GGGACCGTGG TGCCGGGCCC GGCGCCGAGC
AGCAACGGCT CCTCGGCCGG CGGCTCGCTG GTGCACCTGG AGGCCCGCCG CCGTCCGGCG
GAGACCTCCT CGAACGGCTC CGGCGGCGCG CTGGAGCGGG AGCGCGAACG GGATCGCGAG
CGCGAGCGCA CGGCCGCCGA GCGGACCGCC TCGGTCGAGC GCCACCCGTC CTCGATGCCG
GCGTCCGCCG CCGCTTCGGG CGCCGCGGCC GTCAACGGCA CCGCGGGCCG GCAGGGCGTC
CCCGGCCCGT CCGCCAGCCC CGAAGAGGAC TTCGACTTCC TCGACGCCGC CGCCGACGCC
CGCGCCGCAG CGCCGGTCGC CGCGGTCGCC GGACAGTCGG CCGGATCGGC CTTCGACGAC
GCGATCTTCG GTCCGCGCAC CACCACCCCG CACCGCGAGC GGATGGTCGG GACCACCGAC
CGCCAGGCCG AGGCCGACGG CGTGCGGCCG GGGCGGCGGG CCACGGTGCC CTCGTGGGAC
GAGATCGTCT TCGGCTCGCG CCGCGGCAAG CAGAAGGGCC GCGACTGA
 
Protein sequence
MTELRVMAVT SDGQRLVLRS NDGQEFHLTI DERLRAAVRG DRARLGQIEI EAEGQLRPRD 
IQARIRAGAT AQEVADACGI SVERIRRFEG PILAERAFMA EKAQNTQVRR QGENHGQKLG
EIVAERLAKR GAEDPAAVRW DSWRRDDGTW TVQAVYKISG ETYEALWGFD PPRRLVTPED
DEARLLSSDA AAIAAAEPMF PFVAASVLSG GTVVPGPAPS SNGSSAGGSL VHLEARRRPA
ETSSNGSGGA LERERERDRE RERTAAERTA SVERHPSSMP ASAAASGAAA VNGTAGRQGV
PGPSASPEED FDFLDAAADA RAAAPVAAVA GQSAGSAFDD AIFGPRTTTP HRERMVGTTD
RQAEADGVRP GRRATVPSWD EIVFGSRRGK QKGRD