Gene Caci_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1746 
Symbol 
ID8333089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1976280 
End bp1977050 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content71% 
IMG OID644954896 
Productphenylacetate-CoA oxygenase, PaaI subunit 
Protein accessionYP_003112508 
Protein GI256390944 
COG category[S] Function unknown 
COG ID[COG3396] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02158] phenylacetate-CoA oxygenase, PaaI subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.951636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCTA CTACGGAATC CACTCCGTTG GTCGCGCAGT ACGCGCTCCA GCTGGGTGAC 
GATGCGCTGA TCCTGTCGCA CCGTCTGTCG GAGTGGTGCG CGCATTCCCC GGAGCTGGAG
GAGGACGTCG CACTGGCGAA CCTCGCCCTG GACCTCCTAG GGCAGGCGCG GACTCTGCTC
ACATATGCGG GTTCGCTAGA GGGCGCTGGG CGTTCCGAGG ACGACTTGGC GTTCCTGCGC
ACGGAGCGGG AGTTCCGCAA CGTGCTGCTG GTGGAGCAGC CCAACGGCGA CTTCGCGGCG
ACGATCGCGC GCCAGCTGTA CTTCGCGACG TACCAGAGTG AGCTGTACGC GGCACTGTGC
GACTCGACGG ACCCGGAACT GTCCGCGCTC GCCGCCAAGG CGGTGAAGGA AGTCGCCTAC
CACCGCGACC ACGCGGTGCA GTGGACGCTG CGCCTCGGCG ACGGTACCGA GGAGAGCCAC
CGCCGCATGC AGGCCGGGCT GGAGCAGCTG TGGCCGTACA CGGCGGAGCT GTTCGCCGCC
GACGCGGTGG CCACGGAGCT GGTCGCGGCG GGTGTCGCGG TGGACCCGCG GACGCTGCGG
CCCGCGTGGG AGGCGTCGGT GGCGGGCGTG GTCGAGGCCG CGACGCTGAC GATGCCCGCG
GACGGCTGGC AGCCGCGCGG CGGGCGCGCC GGGCGGCACG GCGAGGGTTT CGGGCTGCTG
CTGGGGGAGA TGCAGGCGCT GCACCGGCAG CATCCCGGGG CGAAGTGGTA G
 
Protein sequence
MTATTESTPL VAQYALQLGD DALILSHRLS EWCAHSPELE EDVALANLAL DLLGQARTLL 
TYAGSLEGAG RSEDDLAFLR TEREFRNVLL VEQPNGDFAA TIARQLYFAT YQSELYAALC
DSTDPELSAL AAKAVKEVAY HRDHAVQWTL RLGDGTEESH RRMQAGLEQL WPYTAELFAA
DAVATELVAA GVAVDPRTLR PAWEASVAGV VEAATLTMPA DGWQPRGGRA GRHGEGFGLL
LGEMQALHRQ HPGAKW