| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1734 |
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| Symbol | |
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| ID | 8333077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1963730 |
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| End bp | 1964287 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644954884 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003112496 |
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| Protein GI | 256390932 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.964336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCGACGG GGGAAACCGT GCGAGAACCG GATGGATTCC GGGAGTTCCT GGCAGCGCGC
CAGGCCCATC TGCTGCGCGC GGCGTGGGTT CTGACCGGTG ATGTGCAGTT GGCGGAGGAT
CTGCTGCAGA CGGCGCTGGT CAAGGTGTTG CCGCGGTGGG AGCGGTTGGC GCGGGACGGT
GCGCTGGAGC CGTATCTGCG CAAGACGATG ATCAACACTG CGACGTCGTG GTGGCGGCGG
AGGTGGCACG GGGAGGTGCC CTCGGGGCAT GTGCCCAGCC TCACGGCGCG GCGCGGCGCC
GGGTGGGAGC CGGTCGGCGG GGGAGCGGAG TTCGAGGCGA TCGACGACCG GTCGGTGCTG
GGCGCGGCGC TGCGGGCGCT GCCGGCGCGG CAGCGTGCCG TGGTGCTGCT GCGCTACTAC
CTCGACATGT CCGAGGCCGA GACCGCGGTG ATGCTCGGCT GCAGCCAGGG AACCGTGAAG
AGCCAGAGTT CGAAGGCGCT CGCTGCGCTG CGTGGTCGGC TCGCCCCCGC CCAGCGAGCC
CAGGAGGTCT CGGTATGA
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| Protein sequence | MATGETVREP DGFREFLAAR QAHLLRAAWV LTGDVQLAED LLQTALVKVL PRWERLARDG
ALEPYLRKTM INTATSWWRR RWHGEVPSGH VPSLTARRGA GWEPVGGGAE FEAIDDRSVL
GAALRALPAR QRAVVLLRYY LDMSEAETAV MLGCSQGTVK SQSSKALAAL RGRLAPAQRA
QEVSV
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