Gene Caci_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1713 
Symbol 
ID8333056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1943061 
End bp1943363 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content71% 
IMG OID644954863 
Productzinc finger UBP-type protein 
Protein accessionYP_003112475 
Protein GI256390911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.609811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.790052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCC CCGTGTACGT CCCCGCGAAC GGCGGGCGCT GCGCCCACCT GGACCAGCTC 
CGCGACGCCG AACCGGACTC CGCGGACGAG TGCCGGGAGT GCCGTGCGAC CGGCAGCCGC
TGGCTGCACC TGCGCGAGTG CCTCATCTGC GGCCATGTGG GTTGCTGCGA CAACTCGCAG
AACCGGCACG CCACCGCGCA CTGGCGGGCC ACGGGACATT CGGTGATCCG CTCGCTGGAG
CCCGGGGAGG TCTGGGCCTG GTGTTATCCG GACGAGGCGA TGCTGCTGCG GGCGGATTGC
TGA
 
Protein sequence
MPIPVYVPAN GGRCAHLDQL RDAEPDSADE CRECRATGSR WLHLRECLIC GHVGCCDNSQ 
NRHATAHWRA TGHSVIRSLE PGEVWAWCYP DEAMLLRADC