Gene Caci_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1686 
Symbol 
ID8333029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1914537 
End bp1915778 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content72% 
IMG OID644954836 
Productfumarylacetoacetase 
Protein accessionYP_003112448 
Protein GI256390884 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID[TIGR01266] fumarylacetoacetase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGC CCACCTGGGT CCGGCTCCCG CCCCGGACCG ACTTCCCGGT CGAGAACCTG 
CCCTACGGCG TCGCGACCCA CGGTGAGCGG CCGGCGCACG TGGTCACCCG GATCGGCGAC
TACGTCGTCA GCCTCGGCGC GCTGGCGAAG GGCGGTCTGC TGGACGGCAC GATCGAGGAG
CCGGCGGCGT ACTTCGCGAT CGGCACGCTG AACCCGTTCA TGGCGCTCGG CGCGCCGGCG
TGGGCGGCGG TGCGGGCCCG GCTCACCGAG CTGTTCACCG ACCCCGAGCG CCGCAAGGCC
GTCGAGCCGC TGCTGGTCCC GCTGACCGAC GTGGTGCTGT ATCTGCCCTT CCAGGTGGCG
GACTACGTGG ACTTCTACTC CTCGGAGGAC CACGCCACGA ACCTCGGCCG CATCTTCCGG
CCGGACGGCG AGGCGCTGAT GCCGAACTGG AAGCACCTGC CGATCGGCTA CCACGGCCGC
GCCGGCACGG TCGTGCCCTC CGGGACCCCG ATCGTGCGGC CCTCCGGGCA GCGCAAGGCG
CCGACCGACG AGGAGCCGCG CTTCGGGCCC AGCGTGCGCC TGGACATCGA GGCCGAGGTG
GGTTTCGTCA TCGGCACGCC CTCGCCGCTG GGCGGCGGGG TGCGGGTGGA GGAGTTCCAG
GACCACGTCT TCGGCGTGGT GCTGGTCAAC GACTGGTCCG CGCGCGACAT TCAGGCCTGG
GAGTACGTGC CGCTGGGTCC GTTCCTGGGC AAGTCGTTCG CGACGTCGGT CTCCCCGTGG
GTGGTGCCGC TGGCCGCGCT GCAGGACGCG CGCGTCGCGC CGCCGTACCA GGACCCGGTC
CCGCTGCCCT ACCTGCAGGG CGAGACCTGG GGCTACAACA TCCTCATGGA GGTCAAGCTC
AACGGCCACA CGGTCTCCAC GCCGCCGTTC GCCGGCTTGT ACTGGACCCC GGCGCAGCAG
CTGGCGCACA TGACGGTGAA CGGCGCGAGC CTGCGCACCG GCGACTTCTA CGCCTCCGGC
ACCGTCTCGG GCCCGCTGCC CGAACAGCGC GGCTCCTTCA TCGAGCTGAC GTGGAACGGA
ACCGAGCCGC TGGCCCTGGC CGACGGCTCG ACCCGCACGT TCCTCGTCGA CGGCGACACG
GTCGCGATCG GCGGCGTCGC GCCGGGCCCG AACGGGGCGC GGATCGGCTT CGGCGAGGTC
GTCGGGACGA TCCATTCGGC GGTGCGGCAG CCGGAGCTGT GA
 
Protein sequence
MTQPTWVRLP PRTDFPVENL PYGVATHGER PAHVVTRIGD YVVSLGALAK GGLLDGTIEE 
PAAYFAIGTL NPFMALGAPA WAAVRARLTE LFTDPERRKA VEPLLVPLTD VVLYLPFQVA
DYVDFYSSED HATNLGRIFR PDGEALMPNW KHLPIGYHGR AGTVVPSGTP IVRPSGQRKA
PTDEEPRFGP SVRLDIEAEV GFVIGTPSPL GGGVRVEEFQ DHVFGVVLVN DWSARDIQAW
EYVPLGPFLG KSFATSVSPW VVPLAALQDA RVAPPYQDPV PLPYLQGETW GYNILMEVKL
NGHTVSTPPF AGLYWTPAQQ LAHMTVNGAS LRTGDFYASG TVSGPLPEQR GSFIELTWNG
TEPLALADGS TRTFLVDGDT VAIGGVAPGP NGARIGFGEV VGTIHSAVRQ PEL