Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1686 |
Symbol | |
ID | 8333029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1914537 |
End bp | 1915778 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644954836 |
Product | fumarylacetoacetase |
Protein accession | YP_003112448 |
Protein GI | 256390884 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGC CCACCTGGGT CCGGCTCCCG CCCCGGACCG ACTTCCCGGT CGAGAACCTG CCCTACGGCG TCGCGACCCA CGGTGAGCGG CCGGCGCACG TGGTCACCCG GATCGGCGAC TACGTCGTCA GCCTCGGCGC GCTGGCGAAG GGCGGTCTGC TGGACGGCAC GATCGAGGAG CCGGCGGCGT ACTTCGCGAT CGGCACGCTG AACCCGTTCA TGGCGCTCGG CGCGCCGGCG TGGGCGGCGG TGCGGGCCCG GCTCACCGAG CTGTTCACCG ACCCCGAGCG CCGCAAGGCC GTCGAGCCGC TGCTGGTCCC GCTGACCGAC GTGGTGCTGT ATCTGCCCTT CCAGGTGGCG GACTACGTGG ACTTCTACTC CTCGGAGGAC CACGCCACGA ACCTCGGCCG CATCTTCCGG CCGGACGGCG AGGCGCTGAT GCCGAACTGG AAGCACCTGC CGATCGGCTA CCACGGCCGC GCCGGCACGG TCGTGCCCTC CGGGACCCCG ATCGTGCGGC CCTCCGGGCA GCGCAAGGCG CCGACCGACG AGGAGCCGCG CTTCGGGCCC AGCGTGCGCC TGGACATCGA GGCCGAGGTG GGTTTCGTCA TCGGCACGCC CTCGCCGCTG GGCGGCGGGG TGCGGGTGGA GGAGTTCCAG GACCACGTCT TCGGCGTGGT GCTGGTCAAC GACTGGTCCG CGCGCGACAT TCAGGCCTGG GAGTACGTGC CGCTGGGTCC GTTCCTGGGC AAGTCGTTCG CGACGTCGGT CTCCCCGTGG GTGGTGCCGC TGGCCGCGCT GCAGGACGCG CGCGTCGCGC CGCCGTACCA GGACCCGGTC CCGCTGCCCT ACCTGCAGGG CGAGACCTGG GGCTACAACA TCCTCATGGA GGTCAAGCTC AACGGCCACA CGGTCTCCAC GCCGCCGTTC GCCGGCTTGT ACTGGACCCC GGCGCAGCAG CTGGCGCACA TGACGGTGAA CGGCGCGAGC CTGCGCACCG GCGACTTCTA CGCCTCCGGC ACCGTCTCGG GCCCGCTGCC CGAACAGCGC GGCTCCTTCA TCGAGCTGAC GTGGAACGGA ACCGAGCCGC TGGCCCTGGC CGACGGCTCG ACCCGCACGT TCCTCGTCGA CGGCGACACG GTCGCGATCG GCGGCGTCGC GCCGGGCCCG AACGGGGCGC GGATCGGCTT CGGCGAGGTC GTCGGGACGA TCCATTCGGC GGTGCGGCAG CCGGAGCTGT GA
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Protein sequence | MTQPTWVRLP PRTDFPVENL PYGVATHGER PAHVVTRIGD YVVSLGALAK GGLLDGTIEE PAAYFAIGTL NPFMALGAPA WAAVRARLTE LFTDPERRKA VEPLLVPLTD VVLYLPFQVA DYVDFYSSED HATNLGRIFR PDGEALMPNW KHLPIGYHGR AGTVVPSGTP IVRPSGQRKA PTDEEPRFGP SVRLDIEAEV GFVIGTPSPL GGGVRVEEFQ DHVFGVVLVN DWSARDIQAW EYVPLGPFLG KSFATSVSPW VVPLAALQDA RVAPPYQDPV PLPYLQGETW GYNILMEVKL NGHTVSTPPF AGLYWTPAQQ LAHMTVNGAS LRTGDFYASG TVSGPLPEQR GSFIELTWNG TEPLALADGS TRTFLVDGDT VAIGGVAPGP NGARIGFGEV VGTIHSAVRQ PEL
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