Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1681 |
Symbol | |
ID | 8333024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1907220 |
End bp | 1909784 |
Gene Length | 2565 bp |
Protein Length | 854 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644954831 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_003112443 |
Protein GI | 256390879 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCAA TCACCCCTGA GAACGACATC ATCATCGAGA CCGACGCGCT CAGCGATGAG CTCGGCGCCG AGCTCACGGA CGAGCTCACG GACCTCGGCG AGCTCAGCGA GCTCGAGGAG CCCGAGCTCG AGGAGAACGA CGGCCCGCAC GACGTCGACT TCGACGACAC CGAGTCCGCC GAGGGCGACC CGGTCGCCTT CACCGAGCTG GGCCTGCCCG AGGAACTGGT GAAGAAGCTC GCCGAGAACG GCGTGCACAA CACCTTCCCG ATCCAGGCCG CGACCATCCC GGACGCGCTG GCCGGCCGGC ACGTGCTGGG CAAGGCCCGC ACCGGCTCCG GCAAGACCCT GGCCTTCGGG CTGGCGGCGC TGGCGAACCT GAAGGGCAAG CGGGCCCGCA AGGGCAAGCC GCTGGCCCTG GTCCTGGTGC CGACCCGCGA GCTGGCGATG CAGGTCAGCG ACGCGCTGAC GCCGTACGGC TTCGCCGTGG GCGCGGACAT CGCCGCGGTC TACGGCGGCG CGCCGATGTA CAAGCAGGTC TACTCGCTGC GCCGCGGCGT GGAGCTGCTG GTGGCCACCC CGGGCCGGCT GACCGACCTG ATCGAGCAGG GCGAGTGCGA CCTGTCCGAG GTCGAGATCG CCATCCTGGA CGAGGCCGAC CAGATGGCCG ACATGGGCTT CATGCCGATC GTCACCGAGC TGCTGTCGCA GACCGACCCG ACCGGCCAGC GCCTGCTGTT CAGCGCCACG CTCGACGGCG CGGTCGACGA GCTGGTCCGG CAGTACATGA CCGACCCGGT CCTGCACTCG GTCACCGCCG ACAGCGAAGA CTCCGCGCAG ATGGACCACC ACCTGCTGAT CGTCGAGCCG GCGGACAAGT CGATGGTCAC CGCCGAGATC GCGGCCCGGC ACACCCCGGG CGACGACGAC GGCCGCCGCA CCATCCTGTT CGCCCGCACC AAGCTCGGCG CGGACCGCAT CGCCGAGAAG ATCCGCGAGG CCGGCGTCTC CGCGCTGGCC CTGCACGGCG GCATGACCCA GCGGGCCCGC ACCAAGACCC TCGCGGACTT CAAGGAAGGC CGCGTCCCGG TCCTGGTCGC CACCGACGTC GCCGCCCGCG GCATCCACGT CGACGGCATC GACCTGGTCC TGCACGTGGA CCCGGCCGGC GACCCGAAGG ACTACCTGCA CCGCGCCGGC CGCACGGCCC GCGCCGGCGA GAGCGGCACC GTGGTCACCC TGGTGCTGCC CAAGCAGCGC AAGAGCACGA TGCGCCTGCT GGAGCAGGCG GGCGTGGACG CGGAGCTGAC CCGCGTCGCG CCGAGCTCGG CGGAGCTGCG CGAGCTGACC GGCGGCCGCC CGGTGGCGGA GTACGTCGCC GAGGCCGACG CCTACCACGC GGCCCGCCGC GCGGCGCGCG AGGCCCGCAT GGGCGAGGAC CGGCGCGAGG GCCGCGACGG CGGCTTCCGC GGGAACCGCG AGGGCGGCTT CCGCGGCGGG CGCGAGGGAC GTGACGGGCG CGACGGGCGC GACGGTTTCC GCCAGGACCG CGACCGCTTC GACCGCGGCC ACCGCGGCGG ACGCTTCGAG GACCGCGACA ACCGCGGCGG CGGCTTCGGC GGCGAGCGTT CGGGCTCTGC TTCCGGTTCC GGGTCGGCTT CCGGCGGCGG CGAGCGTTCG GGCTTCGGCT CGGGGTCCCG CTCCGGCTCG GGCTCGGGCT CGGGCTACGG CGGCGAGCGC CGCTCGTTCG GCGACCGCGA CAACCGCGGC GGCGGCTTCA ACGGCCGGGA CTCGCGCGGC GGCTCGGACA GCCGTGGCGG CGAGGGCCGC TCGTTCGACC GCAACGGCTC CGGCCGCACC TTCGACCGCG ACAACCGCGG CGGTTCGGAC AACCGCGGCG GCGGCTTCGG CGGCGGCGAG CGCCGCTCGT ACGGCGACCG CGACGGTGCC CGCAGCTTCG ACCGTGACAA CCGTGGCGGT GGCGAGCGCC GCTCGTTCGG CGACCGCGAC AACCGCGGCG GCGGCTTCGA CCGCGACAAG CGCGGCGGCT CCGAGGGCCG CACCGGCGGC TTCAACGGCG GCGAGCGCCG CTCCTTCGGG GACCGCGACA ACCGGGGAGG CGGCGAGCGC CGTTCCTTCG GCGACCGCGA CAACCGTGGC GGCGGCTTCA ACGGTGGCGA GCGCCGTTCG TTCGGCGACC GTGACAACCG CGGCGGCGGC TTCGACCGCG ACAAGCGCGG CGGCTTCAGC GACGAGCGCC GCTCCTTCGG CGACCGCGAC AAGCGCGGCG GCACCGAGGG CCGCACCGGC GGCTTCAACG GCGGCGGCGA GCGCCGCTCG TTCGGGGACC GCGACAACCG TGGCGGAGGC GAGCGCCGCC CCTACGGCGA CCGCAACAGC ACCCCCAACC GCGGCACCGG CAGCTACGGC AGCCAGCGCC GCGACACCCC CGACGCCGAG CGCCGCACCT TCGGCGAGCG CACCGCCTTC GGCCGCCCCC GCGGCGGCTA CAGCAACGGC ACCGAGCAGC GCGACACCCG CCCGCCGCGC GACCGCCGCT GGTAA
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Protein sequence | MSAITPENDI IIETDALSDE LGAELTDELT DLGELSELEE PELEENDGPH DVDFDDTESA EGDPVAFTEL GLPEELVKKL AENGVHNTFP IQAATIPDAL AGRHVLGKAR TGSGKTLAFG LAALANLKGK RARKGKPLAL VLVPTRELAM QVSDALTPYG FAVGADIAAV YGGAPMYKQV YSLRRGVELL VATPGRLTDL IEQGECDLSE VEIAILDEAD QMADMGFMPI VTELLSQTDP TGQRLLFSAT LDGAVDELVR QYMTDPVLHS VTADSEDSAQ MDHHLLIVEP ADKSMVTAEI AARHTPGDDD GRRTILFART KLGADRIAEK IREAGVSALA LHGGMTQRAR TKTLADFKEG RVPVLVATDV AARGIHVDGI DLVLHVDPAG DPKDYLHRAG RTARAGESGT VVTLVLPKQR KSTMRLLEQA GVDAELTRVA PSSAELRELT GGRPVAEYVA EADAYHAARR AAREARMGED RREGRDGGFR GNREGGFRGG REGRDGRDGR DGFRQDRDRF DRGHRGGRFE DRDNRGGGFG GERSGSASGS GSASGGGERS GFGSGSRSGS GSGSGYGGER RSFGDRDNRG GGFNGRDSRG GSDSRGGEGR SFDRNGSGRT FDRDNRGGSD NRGGGFGGGE RRSYGDRDGA RSFDRDNRGG GERRSFGDRD NRGGGFDRDK RGGSEGRTGG FNGGERRSFG DRDNRGGGER RSFGDRDNRG GGFNGGERRS FGDRDNRGGG FDRDKRGGFS DERRSFGDRD KRGGTEGRTG GFNGGGERRS FGDRDNRGGG ERRPYGDRNS TPNRGTGSYG SQRRDTPDAE RRTFGERTAF GRPRGGYSNG TEQRDTRPPR DRRW
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