Gene Caci_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1671 
Symbol 
ID8333014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1897405 
End bp1898730 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content68% 
IMG OID644954821 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_003112433 
Protein GI256390869 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.124295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACACC ACCTCGGGCA GGGTGTTACC GCGGGCGGGC GGTGGCGGCG GGCTGTGCAG 
TGGACGGCGG CTGCGGCGGC CGTGGGGCTG CTGGCGGGCG CTTGTGGGGG GTCGTCGGGT
GGGAAGAGTT CGGCGGTGGC GCCGGTGGGG GATGGGCAGA CTGCGTCGTC CTCTTCGTCC
TCGTCCGGGG GTGCTGCTGG CGGGGTTGCC TCGTCGGCGC CGTCCTCCGC CGCGCTGCCG
ATAGCGCTGT CGGCGAGTCC TGCGGATGGC GCCAAGGGTG TCGATCCCGG CAAGGGCATC
CAGATCAATG CCGCGAACGG CAAGCTGGAG GCTGTCACGG CCACTGACGC TTCCGGCAAG
GTGGTCAGCG GCGTTTTGGC CTCTGACGGC TCCTCCTGGG CCTCCACGGG GACGCTGGCG
ATCTCGAGTA CCTACACGGT TGTGGCGAAG GCGCAGGACG CCTCGGGGGC GGAGAAGTCG
ACCACCTCGA AGTTCACCAC CCTGACTCCG CAGAAGCGGC TCGGGCTGGA CCATTACGTC
CCGAACGATG GGACCACGGT CGGGGTCGGG CAGCCGGTGG CGGTCTTCTT CACCAACCCG
CCGAACGAGA AGGAGCGCGC GGCCGTCGAG AAGGCGATGA CGGTCACCAC GACGCCGCAC
GTGGACGGCG CGTGGAACTG GCGCGGGGCG ACCGAGGCGG ACTGGCGTCC GGCGAACTAC
TGGCAGCCGG GGACCAAGGT GCAGGTGCAC CTGGGGCTGA ACGGGGTGAA GGCCGGCGAG
GTCACCTACG GCTCGTTCAC CAAGGACTTC TCCTTCACCA TCGGCGACTC GGTGGTCAGC
ACCGTGGACC TGATGAAGGA CAAGATGACG GTCACCAAGA ACGGCAAGGT CGTGCGCACC
ATCCCGGTCA GCGCGGGCGA GGTCCCGAAG CACCCGACCT GGAGCGGCAA GATGGTCGTG
CTGGAGAAGG ACGCGACCCT GCAGATGACC TCCTCCTCGG TGAACTTCAC CGACGCCTCG
GACTTCTACG ACCTGAAGGT CCAGTCCGCG GTGAAGATCA CCAACTCCGG CACCTTCCTG
CACGCCGCGC CCTGGAACGA CGGCAAGTTC GGCCGCGTCA ACGGCAGCCA CGGCTGCATC
GGTATGAGCC TGAGCGACGC CGCGTGGTTC TTCGGCACGG TGCAGATCGG CGACGTGGTG
GACGTGCTGC CCTCGGCGAA CACCAAGCCG AACGTCACCA ACAACCCCGA CCCCGGCTTC
GACGACTGGA ACCTGAGCTG GAGCCAGTGG TTGAAGGGCT CGGCGGCGGG AGTGCAGGGA
GCTTAG
 
Protein sequence
MAHHLGQGVT AGGRWRRAVQ WTAAAAAVGL LAGACGGSSG GKSSAVAPVG DGQTASSSSS 
SSGGAAGGVA SSAPSSAALP IALSASPADG AKGVDPGKGI QINAANGKLE AVTATDASGK
VVSGVLASDG SSWASTGTLA ISSTYTVVAK AQDASGAEKS TTSKFTTLTP QKRLGLDHYV
PNDGTTVGVG QPVAVFFTNP PNEKERAAVE KAMTVTTTPH VDGAWNWRGA TEADWRPANY
WQPGTKVQVH LGLNGVKAGE VTYGSFTKDF SFTIGDSVVS TVDLMKDKMT VTKNGKVVRT
IPVSAGEVPK HPTWSGKMVV LEKDATLQMT SSSVNFTDAS DFYDLKVQSA VKITNSGTFL
HAAPWNDGKF GRVNGSHGCI GMSLSDAAWF FGTVQIGDVV DVLPSANTKP NVTNNPDPGF
DDWNLSWSQW LKGSAAGVQG A