| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1649 |
|---|
| Symbol | |
|---|
| ID | 8332992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 1870335 |
|---|
| End bp | 1873079 |
|---|
| Gene Length | 2745 bp |
|---|
| Protein Length | 914 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644954799 |
|---|
| Product | transglutaminase domain protein |
|---|
| Protein accession | YP_003112411 |
|---|
| Protein GI | 256390847 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.987605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCA GACTGCGCAT AGGCATAGCC GCGGCCGTCG CGCTGCTGCT GACCTCCTCG
GGGTTGCTGC GACTGCTGGC GCCCGGCTCG TGGGTGTGGC CGATCGTGCT GGCGGTGATC
GTGGCGACCG CCTCCGGCGA GCTGTTCCGG CGGCTGGTGC GGCCGCGGCC GCTGGTGGTG
CTGGCCCAGG CCGCGGTCGT GTTCTGGTAC GACATGGTGC TGCTGGCGCA CGACGTCGCC
TTCGCCGGCG TGCTGCCGAC CTGGGCCGTC TTCGACAAGC TCGGAAACCT GTACTCCACC
GGCGCGCACG ACATCCGCGA CACCTTCGTC GGCGGCCAGG CCACCTCCGG CATCGCCGCG
ATCCTGGTGC TCTCGCTGAG CGCGCTGGCG GTGCTGGTGG ACGCCCTCGC CGCGACCTAC
GCCGCCGCGC CGCTGGCCGG CCTGCCGCTG CTGGCGCTGT ACCTGGTCCC GGCCACCCGC
AGCGGCGGCG GCTACGACTG GCTGGCGTTC GCGCTGGCGG CCGGCGGCTA CACCGCGCTG
CTCTCGGCGG AAGGCCGCGA CCGCCTCGGC CGCTGGGGAC GGCCGCTGGT CCACGCCGGA
CGCCAGCGGA CCGGCGCCGA CGGCAAGCCG GTCGCCGCGC CCAAGGCGCG GGTGGACACC
GGGCCGATCG CCGCCACCGG ACACCAGATC ACGATGTACG CGCTGATCGT CGCGGTCCTG
GCGCCGGTGC TGCTGCCCAC GGTCGCCGGC GGGCTGTTCG GGATCGGACC GGACAGCGGC
AGCGGGACCG GGAACGGCCA CCACAAGGGC AACGGCTCGT TCAGCCAGGT GCTGGACCTC
AAGGCGAATC TGGGCTCGCT GACCGACGAC CCGGTCCTCG ACTACAACTC GGCCAAGCCG
GAGTACATCC GGCTGCAGAC GCTGGACGTG TTCGACCCGA AGAGCACCAC GCCCTGGACC
CCCGACCCGT CGCTGCAGCT GAAGGGGCTG GCAGCCGACG GGACGGTCTC CAGCACCGTG
CCCGGGCTCG TGGCACCGAC CCAGCCGCAG ACCGTCCCGA TGCAGATCAC CTACCTGACC
GAGGAGAGCA CGAAGGTCAG CCCGACCAGC AATCTCAGCT CGCTGCCGGT GCCCTACCCC
GCCAAGCAGG TCACCGGGCT GGCAGCCGGG TTCGAGGTCG ACCCCGACTC GCTGGCGGTC
CTGGGCGTCT CCCCGGTGTT CAACACCATG ACCTACCGCG CGACGGTCTA CGACACGACC
TCGATCCCGC CGGCCGAGCT GGCCGCCGCG ACCGGGCCGA CCTCCGACGA CAAGACGTTC
TTCAACCTGA GCCGGGACCT GGACACCACA GACATCCCGC CGTACATCAA GCAGCTGGCC
GAGCAGATCA CCGCGGGCCT GACCAACCCG GTGGACAAGG CCCAGGCGAT CCAGAACTAC
TTCCAGAACT CGGCCAACCA CTTCAGGTAC ACGCTGGACG TGCCGAAGAA CCCGACCGGT
CTGAGCGCCA TGCAGTGGCT GTTGCAGAAC AAGGCGGGCT ACTGCCAGTT CTACGCCGAG
ACCATGGCCG CGATGGCGCG CTCGATCGGC ATCCCGGCGC GGATCGCGGT GGGCTTCACC
CCCGGGCAGT CCGTCGGCGG CGACACCTGG GCCGTGAAGA TGCACGACTA CCACTCCTGG
CCGGAGCTGT TCATGCACGG CGTCGGCTGG CTGCGGTTCG AGCCGACGGT CGGCATCGAC
AACATAGCGA CCACCAGCGG CGGCCACGGC CGGATCCCGA GCTACAGCAC CAACACCACC
ACGAGCACCA CCACGGCGCC GTCGCAGAAC CCGACCACGT CCTCCGCGCC CGGCGCCGGG
GCGTCCTCGG CCGCCAACTG CCCGGTGAAC ATCCGCAAGG CCGGCGGATG CTCGGCGAAC
CTGGAGGACG GCGGCACGGC GAGCGCGCCG AAGTCGAAGT TCAGCTGGCT CGGCTGGTTC
GGCTCGGTGC CGCGCTTCCT GCAGTACTGG CTGTTCGGCG GCTCCGGCTA CGCGATCGCG
GTGCGCTTCA TCCTGCTGGC GCTGCTGCTC ATCGCCTGCG TCCCGATGGT GGTGCGGATC
GTGCGCCGCC GGGCCCGCTG GAAGCTGGCG GCGGGACGGC GCGCGGGCAA GCGCGCCAAG
TCCGGCGGCG GGGACGAGGA CGGGCTCGAC TGGGAGTCCG CCGACGTGCC CGCCGCCCGC
CGGCCCGAGG AGGACCCGGA GCGGCTGCGG ATCCTCGCGG CCTGGGACGA GGTCCGCGAC
AGCGCGACCG ACCTGGGCTA CACCTGGCCG ACCTCGGAGA CCCCGAGGCG CAGCGCCGAG
CGGATCATCA AGCAGGCGCA CCTGTCGCGC CCGGCGCAGG ACGCCATGGG CCGGGTCACG
GTGCTGGCCG AACGGGCGAA CTACGCGCGG ACGCTGCGGC GCCCGGCGCC CTCGGGCGCG
GCACCGACGC CGAACCTGCT GGACGACGTG AAGGAGATCC GCGCCGGGCT GGCCGAGCCG
GTCTCGCGGC GTACCCGGAT CCGCGCGACG GTGCTGCCGC CCTCGGCGAT GGCCGCGCTG
CGCGAGCGGC GGGAGGACTT CACCGGGCGG GTCTACGAGC GGGTGCAGGG CACCGGCTCG
CGGCTGCGGG CTCGGACGCC TGGCGCTGTG GGGCGGTCGC GACCGGAGGG GCGGGACGGG
CGAGAAGGGC GGGAAGGTCG GGAGGATCAG CGGCCTCGGC AGTAG
|
|---|
| Protein sequence | MTGRLRIGIA AAVALLLTSS GLLRLLAPGS WVWPIVLAVI VATASGELFR RLVRPRPLVV
LAQAAVVFWY DMVLLAHDVA FAGVLPTWAV FDKLGNLYST GAHDIRDTFV GGQATSGIAA
ILVLSLSALA VLVDALAATY AAAPLAGLPL LALYLVPATR SGGGYDWLAF ALAAGGYTAL
LSAEGRDRLG RWGRPLVHAG RQRTGADGKP VAAPKARVDT GPIAATGHQI TMYALIVAVL
APVLLPTVAG GLFGIGPDSG SGTGNGHHKG NGSFSQVLDL KANLGSLTDD PVLDYNSAKP
EYIRLQTLDV FDPKSTTPWT PDPSLQLKGL AADGTVSSTV PGLVAPTQPQ TVPMQITYLT
EESTKVSPTS NLSSLPVPYP AKQVTGLAAG FEVDPDSLAV LGVSPVFNTM TYRATVYDTT
SIPPAELAAA TGPTSDDKTF FNLSRDLDTT DIPPYIKQLA EQITAGLTNP VDKAQAIQNY
FQNSANHFRY TLDVPKNPTG LSAMQWLLQN KAGYCQFYAE TMAAMARSIG IPARIAVGFT
PGQSVGGDTW AVKMHDYHSW PELFMHGVGW LRFEPTVGID NIATTSGGHG RIPSYSTNTT
TSTTTAPSQN PTTSSAPGAG ASSAANCPVN IRKAGGCSAN LEDGGTASAP KSKFSWLGWF
GSVPRFLQYW LFGGSGYAIA VRFILLALLL IACVPMVVRI VRRRARWKLA AGRRAGKRAK
SGGGDEDGLD WESADVPAAR RPEEDPERLR ILAAWDEVRD SATDLGYTWP TSETPRRSAE
RIIKQAHLSR PAQDAMGRVT VLAERANYAR TLRRPAPSGA APTPNLLDDV KEIRAGLAEP
VSRRTRIRAT VLPPSAMAAL RERREDFTGR VYERVQGTGS RLRARTPGAV GRSRPEGRDG
REGREGREDQ RPRQ
|
|---|
| |