Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1645 |
Symbol | |
ID | 8332988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1864927 |
End bp | 1865901 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644954795 |
Product | Pirin domain protein |
Protein accession | YP_003112407 |
Protein GI | 256390843 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.156047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGGCG CCGTGAGCAA CCTGGACGCG CATCCCACCG AGCAGGACTG CCGCGCCAAG GGCGATCCGG GTCCGGTGGT CGAGTTCTAC GAAGCGCGCG ACGTTCCGCT CGGCGGGGTG CGGGGCGTCC ATGTCCTGCG CGCGCTGCCG CAGCGGGTGT TGCCGACCGT CGGCGCCTGG TGTTTCCTGG ACCACTTCGG CCCGGACACC ACGCCGATGA ACGTCAACCC GCACCCGCAC ATCGGCCTGC AGACCGTCAC CTGGCCGTTC CAGGGCGACG TGCGGCACCG GGACAGCGTC GGCTCCGACG TCGTGGTCCG GCCGCGCCAG CTGAACATCA TGACCGCCGG GCGCGGCATC GCGCACTCGG AGATCGGTGT GGAGGCAAGC CAGACGGGAC ACGGCCTCCA GCTGTGGACC GCGCTGCCGG AAGAGCACCG CGACACCGCG CCGCACTTCG AGCAGCACCA GAAGCTGCCG GTCTACGAGC TCCCGGGTCT GCGCGCGCTG GTCTTCCTCG GGACGCTGGA CACCGTCACG TCCCCGGCGA CCGCCTACTC CCCGATCGTC GGCGCCGACA TCACGATCAA CCCCGGCGCG ACGGCGACGA TCCCGCTGAC CCACTACCAC GAGCACGCCG TGCTGGTCAT CGACGGCGAC CTGACGGTGG CCGACACCGA CCTCCCGCCC GGCCCGCTCC TCTACCTCGG CACCGGACGC AGCGGACTGA CGCTCACCAG CCACGCCGGC GCGCACCTGA TCCTCCTCGG CGGCGAGCCG TTCCGCGAGG ACATCGTCAT GTGGTGGAAC TTCGTGGGAC GCAGCCACGA AGACATCGAA GAGGCCCGCG ACGACTGGGA GAAGCGCGAC GTGGAACGCT TCCCGGACAT CGCGGGCCAC ACGGTCGAGG AGCGCATCCC CGCACCGCCG CTACCAGGCA TCCGCCTTAA GCCGCGCGGC CGTGGACCTC GCTAG
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Protein sequence | MAGAVSNLDA HPTEQDCRAK GDPGPVVEFY EARDVPLGGV RGVHVLRALP QRVLPTVGAW CFLDHFGPDT TPMNVNPHPH IGLQTVTWPF QGDVRHRDSV GSDVVVRPRQ LNIMTAGRGI AHSEIGVEAS QTGHGLQLWT ALPEEHRDTA PHFEQHQKLP VYELPGLRAL VFLGTLDTVT SPATAYSPIV GADITINPGA TATIPLTHYH EHAVLVIDGD LTVADTDLPP GPLLYLGTGR SGLTLTSHAG AHLILLGGEP FREDIVMWWN FVGRSHEDIE EARDDWEKRD VERFPDIAGH TVEERIPAPP LPGIRLKPRG RGPR
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