Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1617 |
Symbol | |
ID | 8332960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1836985 |
End bp | 1838514 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644954767 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_003112379 |
Protein GI | 256390815 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00553824 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0299379 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACA CCGCGACCGA CAAGACCTAC ATCGTCCGCA CCTACGGCTG CCAGATGAAC GTCCACGACT CCGAACGCCT CTCCGGCCTG CTCGAGGGCG CCGGCTACGT GCGCGCGGCC GATGGTGCCG GCGAGGCGGA CGTGGTGGTG CTCAACACCT GCGCGGTGCG GGAGAACGCC GACAACCGGC TCTACGGCAA CCTGGGGCAC CTGGCCTCGG TGAAGGCCGG GCGGCCTGGG ATGCGGATCG CGGTCGGGGG GTGTCTGGCG CAGAAGGACC GCGGGGAGAT CACGCGGCGG GCGCCGTGGG TCGACGTGGT GTTCGGGACG CACAACATCG GGTCGCTGCC GGTGCTGCTG GAGCGGGCGC GGGTGCGGGA CGAGGCCCAG GTGGAGATCC TGGAGTCGCT CGACGTGTTC CCCTCCACGC TGCCGACGCG GCGGGAGTCG GCGTACGCGG CGTGGGTCAG CGTGTCGGTC GGGTGCAACA ACACCTGCAC CTTCTGCATC GTGCCGGCGC TGCGCGGCAA GGAGAAGGAC CGGCGGCCCG GCGAGATCCT GTCGGAGATC GAGGCACTGG TCGCCGAGGG CGTGTGCGAG GTGACGCTGC TCGGGCAGAA CGTCAACGCG TACGGGTCGG AGTTCGGAGA CCGCGAGGCG TTCGCGAAGC TGCTGCGCGC GTGCGGGCAG ATCGAGGGTC TGGAGCGGGT GCGCTTCACC TCGCCGCACC CCCGGGACTT CACCGACGAC GTGATCGCGG CGATGGCCGA GACGCCGAAC GTCATGCCCC AGCTGCACAT GCCGCTGCAG TCCGGCTCGG ACACGGTGCT GCGCGCGATG CGCCGCTCCT ACCGGCAGGA CCGCTACCTG GGCATCATCG AGCGGGTCCG CGCGGCGATG CCCGACGCGG CGATCACGAC CGACATCATT GTCGGCTTCC CCGGGGAGAC CGAGGAAGAC TTCGAGCAGA CGATGCACGT CGTGCGCCAG GCGCGGTTCT CGGCGGCGTT CACCTTCCAG TACTCCAAGC GGCCCGGCAC GCCGGCGGCC ACGATGGAGG AGCAGGTGCC CAAGGCGGTC GTGCAGGCGC GGTACGAGCG GTTGGTCGCG CTGCAGGAGG AGATCTCCTG GGAGGAGAAC AAGAAGCAGG TCGGGCGGAC CGTCGAGCTG CTGGTCGCCG AGGGCGAGGG ACGCAAGGAC GGCGAGACCC GGCGGATGTC GGGGCGGGCT CCGGACAACC GGCTGGTGCA CTTCGCCGTC GGGGACACCG CGGCCGCCGA CCTGCCGCGT CCCGGCGACA TGGTCTCGGT GGAGGTCACC TACGCCGCGC CGCACCACCT GAACGCCGAC GGTCCGGACG GCGCGAGCGC TATCAAGGCC CTGCGACGTA CCCGGTCCGG GGACGCTTGG CAGGCTCGGC AGGAGCAGCC GGAGTCCGAG CGGCGCGCGG CGGCCGTCAC GCTGGGGATG CCGTCGATCG GCAAGCCGGC GGTGTCGGCG GAGGCGGAAA GTGCTTGCGG CGTCTGCTGA
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Protein sequence | MPDTATDKTY IVRTYGCQMN VHDSERLSGL LEGAGYVRAA DGAGEADVVV LNTCAVRENA DNRLYGNLGH LASVKAGRPG MRIAVGGCLA QKDRGEITRR APWVDVVFGT HNIGSLPVLL ERARVRDEAQ VEILESLDVF PSTLPTRRES AYAAWVSVSV GCNNTCTFCI VPALRGKEKD RRPGEILSEI EALVAEGVCE VTLLGQNVNA YGSEFGDREA FAKLLRACGQ IEGLERVRFT SPHPRDFTDD VIAAMAETPN VMPQLHMPLQ SGSDTVLRAM RRSYRQDRYL GIIERVRAAM PDAAITTDII VGFPGETEED FEQTMHVVRQ ARFSAAFTFQ YSKRPGTPAA TMEEQVPKAV VQARYERLVA LQEEISWEEN KKQVGRTVEL LVAEGEGRKD GETRRMSGRA PDNRLVHFAV GDTAAADLPR PGDMVSVEVT YAAPHHLNAD GPDGASAIKA LRRTRSGDAW QARQEQPESE RRAAAVTLGM PSIGKPAVSA EAESACGVC
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