| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1596 |
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| Symbol | |
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| ID | 8332939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1808008 |
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| End bp | 1810344 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644954746 |
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| Product | Glycoside hydrolase family 42 domain protein |
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| Protein accession | YP_003112358 |
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| Protein GI | 256390794 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCA CGGTTCGACG CGGTGCGGTT CCACTCATGT GCGGCCTCGC CGCGACGGTG
GGGCTCGCCC AGTACGCGAC CGCCAGCCCC GCACCAGCAA GCACGATTTC CGCGCGATCC
ACCACGGTCG CGGCCGCCGA TCAGAACGCC GGCCAGAGCA CCGACCAGAG CGCCGCGGCG
CGCCACGACG CACCTTCGGA CTACTGGGCT TCGCAGTTCC AGTTCGACAA CAACGGCACG
CCGTGGTCGA CGGCCGACTT CGCGGCGGTC AAGGCCAAGG GGATCAACCG CGCAGAGCTC
AACATGCCCT GGTCGAAGCT GGAGCCGGCG CGCGGCACCT TCGACTTCAC CGAGATGGAC
CAGGAACTGG CCAACGCCGC CGCGGCGGGC GTCAAGCTGG TGCCGATCTT CTGGCAGTCC
GGCTGGGGCG GAAGTCCGGC GACCTTCGAG ACCGACCACG AGGTGACCAG CACCGGCGCC
ACCGGCGTCG CGCTGGCCTG GTGGGACAAG ACCGAGCAGA ACGACTACTT CGCCTACGTC
ACGGCCACCG TCGCGCACAT CACGCACAGC CCGGGCTACG GCGGTTCGTT CATGGACTAC
GGCCACCTCG ACGCGCAGTG GCTGGACAAC CCCGGCGAAG GCGGCTGGGC TCCGGCGGAC
ATCGCGTACT TCCACACCAA CTGGCTGCCG GCCACGTACA AGACCATCAG CGCCTTCAAT
GCCAAGTACA GCACCACGTA CACCTCGTTC GGCGAGGTAC CGGCCGCGCT CCCCGGTGCC
CCGTTGGACA GCGTGTACCA GGCGTTCCGG CAGTGGAGTG TGCAGGACAC CTACGACCGG
CTCACCGCTT CGGTCCGCAA GGTCAGCAAC GGTCCGCTGT TCTACTACTT CGGCGGGCAC
GTCGCCAACG CCCCGCAGCT GGGCAACCTA CCGGACATCT TCTTCAACCT GGCCAGGAAG
TATCACGCCA CGGTCGTCGA GGACGCCGCG AACTCCGCCG GTCTGAGCCT GCTGTTCGGC
AGCCTGGGAC GCGCCTACCA AGTCCCGGTC GCCCAGGAGT GGACTGTCTT CGGCACGGAC
GATCAGATCC CTGCCGAAGC CGTGAACTGG CTGTCCATGT ATCCCATGAT GCTGCCCCAC
GGCGGCGGTG AGGACTTCTT CATCCACGAC GGCACGACCA AGGACGTCAT CGGCTACCCG
ATCTACACCT CCTGGCTGCC GACGCTGCAG AAGATCACCG GCTCCTACCC GACGCAGCCG
GTCGCGGTCT ACATCGACTA CTCGCAGGCC CGCGGCAACG ACAGCGGCGG CAGCCTGAGC
AGTGTCGAGA ACAGCATCGG CGCGCTGTGG TCCGGCTACC AGGCCGGCTT CTCGGTGGTC
ACCAGCGAGG AGATCGCGAA CCACGCCGAC AGCCTGTCGC ACTATCGCGC CGTGCTGCCG
ATGAACGGCT CGGACGCCAA CATCGCCGCG TACCAGAAAG CCGGCGGAAC GGTGCTGAGC
AACGGATCCC AGCTTCCTTC CTACGCACCG GCCTACGCCG ACCTGACCAG CCAGCAGGCG
CTCCAGGTCG TCCCGGCCAC CGCCGCGGAC CACCGCAGCT CGGCGATCTC GCTGGGCGAG
GTGAGCCCGA CCTTCGGCTA CACCGGCTCG GTCACGCTGC ACCCGAACGG GCTGAACCTG
GTCAAGGGCA CCTACCACGT CGTGGACGCG CTGACCGGAC AGGTCCCGGC GCAGAAGGCG
CTGTCCGACG GCAGCGTGTG CGTACCGGTC GCGATGAAGT CCGCGCAGCT CGACCAGTGG
TCGATGCTGC CCGGCGCGGC GCCGACCGGC ACCCCGGTCC CGGCGGCGTG CCCGACCACC
AGCGGCGGCG CGACCTCGGT CACCGGTACC GCCGGACAGA GCGGCGGCGG TCTGATCTTC
CTGTCCGTCG GCGCGACGGG TCTGGGCGGC GACGGCAACC TCACCCAGGT CACCCAGGAC
GGCCAAACCG CTTACGAAAC CTGGACTTCC GCGCAGAGCG GCGTCACGCC GGCCAACGTG
TACCTCCAGC TGGACCCCTC CAGCCAGGTC GCCAAGGCCT CGACGGTGAC GGCGAGCGTC
ACCTACTGGT CGGTCGCCGG CCAAGGCTTC CAGGTGCAGT ACGACTCCCC CGGCGCCCCG
TACTTCGGCG GACCGACCGT GGCGGGCAGC GGTACCGGCA GCTGGCAGAC CGCGACGGTG
ACGCTGACGA ACGTGCAGTT CGCCGAACTG CAGAACCTGT CCGCGGACCT GCGGCTGGCA
GTCACCGATC CGACTCAGCC CTTGTATGTC AGCAGCGTGA CGCTCTCCAG CAGCTGA
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| Protein sequence | MLRTVRRGAV PLMCGLAATV GLAQYATASP APASTISARS TTVAAADQNA GQSTDQSAAA
RHDAPSDYWA SQFQFDNNGT PWSTADFAAV KAKGINRAEL NMPWSKLEPA RGTFDFTEMD
QELANAAAAG VKLVPIFWQS GWGGSPATFE TDHEVTSTGA TGVALAWWDK TEQNDYFAYV
TATVAHITHS PGYGGSFMDY GHLDAQWLDN PGEGGWAPAD IAYFHTNWLP ATYKTISAFN
AKYSTTYTSF GEVPAALPGA PLDSVYQAFR QWSVQDTYDR LTASVRKVSN GPLFYYFGGH
VANAPQLGNL PDIFFNLARK YHATVVEDAA NSAGLSLLFG SLGRAYQVPV AQEWTVFGTD
DQIPAEAVNW LSMYPMMLPH GGGEDFFIHD GTTKDVIGYP IYTSWLPTLQ KITGSYPTQP
VAVYIDYSQA RGNDSGGSLS SVENSIGALW SGYQAGFSVV TSEEIANHAD SLSHYRAVLP
MNGSDANIAA YQKAGGTVLS NGSQLPSYAP AYADLTSQQA LQVVPATAAD HRSSAISLGE
VSPTFGYTGS VTLHPNGLNL VKGTYHVVDA LTGQVPAQKA LSDGSVCVPV AMKSAQLDQW
SMLPGAAPTG TPVPAACPTT SGGATSVTGT AGQSGGGLIF LSVGATGLGG DGNLTQVTQD
GQTAYETWTS AQSGVTPANV YLQLDPSSQV AKASTVTASV TYWSVAGQGF QVQYDSPGAP
YFGGPTVAGS GTGSWQTATV TLTNVQFAEL QNLSADLRLA VTDPTQPLYV SSVTLSSS
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