| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1577 |
|---|
| Symbol | |
|---|
| ID | 8332920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1780995 |
|---|
| End bp | 1781762 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644954727 |
|---|
| Product | protein of unknown function DUF81 |
|---|
| Protein accession | YP_003112339 |
|---|
| Protein GI | 256390775 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATGG CGCACGGGGT GGGCCTGCTC GGCGCGGCGG CGGGAGCCGG CGGAGTGGAC
GCGATCGTCG GCGGCGGAGG GCTGATTCAG TTGCCCGCGC TGCTGTTGGC GTATCCGACG
CTGCCCGCGG CTGCTGCGCT CGGCACGAAC AAGCTCGCAT CGATATCCGG CACCAGCACC
GCCGCGGCCA CGTACCTGCG CCGCACGAAA GTGGACCGGC GCGTGATGCT CCCCGCTGCG
GCGCTGGCCG TGGTGTGCGC GGGATTCGGC GCGGTCTCGG CGTCCAGCCT GCCGACGAGC
GTGTTCCGCC CGATCGTGAT GGCGCTGCTG GTCTGCGTCG CGATGTTCGT GGTGTTCCGG
CCCTCGTTCG GCGCCCAGGA GGCGGGCATG GAGGCGTCAC CGCGCCGCCG CCTGGCCACG
ACCCTGGCGG CGGGCATCGG AATCGGCTTC TATGACGGCA TCTTCGGCCC GGGCACCGGC
ACATTCCTGA TCATCTGCTT CGCCGTGGGC ATCGGTACGT CATTCGTCGC CGGCTCAGCG
ATGGCCAAAG TGGTCAACGC CGGCACGAAC TTCGGCGCCC TGCTGGTATT CGCCACGCAA
GGCCACGTGA TGTGGGCGCT AGGCGCAGGA ATGGGCGCCT GCAACATCAT TGGCGCCCGC
ATCGGAGCAC GCCTGGCGCT GAAGCGCGGC GCCGGATTCG TGCGAGGCGT GCTGCTGGTC
GTGGTGGCGG TGATGGTGGT GAAGATGGGC TTCGACCAGT TCAGCTAG
|
|---|
| Protein sequence | MDMAHGVGLL GAAAGAGGVD AIVGGGGLIQ LPALLLAYPT LPAAAALGTN KLASISGTST
AAATYLRRTK VDRRVMLPAA ALAVVCAGFG AVSASSLPTS VFRPIVMALL VCVAMFVVFR
PSFGAQEAGM EASPRRRLAT TLAAGIGIGF YDGIFGPGTG TFLIICFAVG IGTSFVAGSA
MAKVVNAGTN FGALLVFATQ GHVMWALGAG MGACNIIGAR IGARLALKRG AGFVRGVLLV
VVAVMVVKMG FDQFS
|
|---|
| |