| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1556 |
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| Symbol | |
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| ID | 8332898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1759120 |
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| End bp | 1761498 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644954705 |
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| Product | NB-ARC domain protein |
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| Protein accession | YP_003112318 |
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| Protein GI | 256390754 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.56411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0240441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGACC CGGCGATCTC CGCCGCCCCC GATCCCGCCG GCGCGGTCGA TCTCGCCGAC
TTCATCGAGC GGCTCCGGAT GCTGCGCGCG CACGCCGGCT CGCCGTCCTT CCGCCTTCTG
GCCAAGCGCG TGGGTCCCCT CCTGAAGCCG CCGCAGGAAG TCACGCACTC CACGGTGAGC
GACGTCTTCG ACCCGGCGCG CCGCCGGCTG AACCAGGAAC TGGTCGCGGC GATCGTGCAG
GCGCTCGGGG TGACCGAGGC GCAGGCGGCG CGGTGGCGGG CGGCATGCGT GGCGGCGCAC
GCGACGCGGC GGCCCGCCGG GACCGTCGGG GTGTTCCGGC AGCTGCCGGC AGAGCTGGCG
ACGTTCACCG GACGGCGGGA GGAACTGGCT GCGCTGATGG CGCTGGTCGG TGAAACCGGC
GCTGGTCTCG GTAGCGGTAG CGGTAGCGGT ATCAGCACCG GTACCAATAC CAGCGCGCCG
CAGACCGTTG TCGTCTCCGC GATCGAGGGG ATGGCCGGGA TCGGCAAGAC CCAGCTGGTC
ATCCGCGCCG CGCACGAGCT GGTGCGCGCG GGGCGGTTCG CCGACGTCCA GCTGTATGTG
AATCTGCGCG GCTTCGACGC CGAGGCGGCG CCGGCCGATC CTTCCGACGT CCTGGATTCC
TTTCTGCGCC AACTGGAAGT GCCGGCGCGA CGCATTCCGG AGGACCGCGA CGAGCGCGCC
GCGATGTTCC GCGACCGGAT CGCCGGCCGC GACGCCCTGC TGGTGCTGGA CAACGCCGCC
GACGAGGCGC AGGTCGCCGA CCTGATCCCG GCCGACCCGC GCTGCCTGGT GCTCCTCACC
AGCCGCCGGA ACCTGGCCGG GCTGGACGGC GCGCGCCTGT TCCGCCTCGA CGTCTTCCCG
CCGCGCGACG CGCTGGAGCT GCTGGCGCGC GTGGTCGGGC AGGAGCGGGT CGCGGCCGAA
CCGGAGGCCG CCGCCGAAGT GGTGCGGCTG TGCGGGTTGC TGCCGCTGGC GGTGTCGCTG
GCCGCCGCCC GGCTGCGGTC GCGGCCGGCG TGGAGCTTGG AGCGGCTGGC CGCGCACCTG
CGCGACAGCG GACTGGACGC GGTGCGCGCT GGGAGCCGGG AGCTGCGTCC GGTGTTCGAC
TTGTCCTATC GCGATCTGCC GGCGGCCACG GCGCGCGCCT TCCGGTTGCT GAGCCTGCAT
CCCGGCCGCG GGTTCACCAG CGGCGCGGTG GCGGCGCTGA GCGGCACGTC CGAGGGAGCG
GCGCGCGCCG CTTTGGAAGC GCTGGTCGAC GAGAACCTGA TCGAGCAGCG CACCGCGGAT
CGGTACGAGC TGCACGACTT GCTGCACGCC TATGCGGTGG AGCGTGCGCA GATCGACGAG
AGCGCGGCGG AGCGCGAGGA GTCGCTGGGG CGGTTGCTGT CGTGGTACCT GCACACGACC
GAGAATGTGG CGCGCGCTGT GGAGAACCGG CGGCTCCTGG AAACGTTGCC GACGCTGCCG
AGCGAGCCGG CGGCGCCGCG GTTCGCCTCC GCGCAGGAGG CGATGGCCTG GTACGACGCC
GAGCGCGAGA ACCTCAGCGC GGTCCTGATG TGCGCCGCCG ACACCGGACG GCACGACCTC
GCCCTGCGAC TGCCGGTCAC GCTGCTCGGG TGCTATCAGC GGCGCAAGGA CTGGGCCCGG
TGGCGCTCGG CGTACGAGAC CGGGCTGGAC AGCGCGCGCG AGGCCGGCGA CCGGACCGCG
CAGGGCAGGT TGTACAACGG GCTCGGGCTG GTGCTGTTCG ACCTGCGCGC CTACCCCCAG
GCGATCGAGG TCTACGGCGA GGCGCTGGCG CTCGCCGAGG AGATCGGCAG CACGCGGCAG
GTCGCCTCGA TCCTGGGCAA CATCGGGGAC TGTCACTGCC GCCTCGGCGA CTTCGGCACT
GCCGAGACGG TAATCCGCCG CAGCCTGGCG CTGTTCCGCG AGATCGGCGA CCCGCAGAAC
CTGGCGTCCT CGCTGTGCAA CTACGGGGTC CTGCTCCACG AGGCGAAGCG TTTGGAGGAG
TCGCACGCCA CGTACAGCGA AGCCCTCGCC GCCTCGCGCA AAGCGGGCAA CCGCCGCTTT
GAGGCGATCA TCGCCTTCAA CCGCGCCGAG GTCTGCATGG ACCAGGACCG TCCCGCCGAG
GCCGAGGAAG ACTACCGGCT GGCGCTGACG GCCGCGCAGG ACGCCGACGA CCGCCCGACC
GAGGCGGAGG CCCGGCGGTC GCTGGCGCGG CCGCTGAGGG CGCTCTCGCG GCCCGCGGAG
GCCCGGGAGG CACTGCGGGC GGCGCTGGCC CTGTTCGAGG CGCTGGGGTC CCCGGAGGCG
GCGGTGACGC GGGAGCGGTT GGCCGAGCTC GGGGACTGA
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| Protein sequence | MTDPAISAAP DPAGAVDLAD FIERLRMLRA HAGSPSFRLL AKRVGPLLKP PQEVTHSTVS
DVFDPARRRL NQELVAAIVQ ALGVTEAQAA RWRAACVAAH ATRRPAGTVG VFRQLPAELA
TFTGRREELA ALMALVGETG AGLGSGSGSG ISTGTNTSAP QTVVVSAIEG MAGIGKTQLV
IRAAHELVRA GRFADVQLYV NLRGFDAEAA PADPSDVLDS FLRQLEVPAR RIPEDRDERA
AMFRDRIAGR DALLVLDNAA DEAQVADLIP ADPRCLVLLT SRRNLAGLDG ARLFRLDVFP
PRDALELLAR VVGQERVAAE PEAAAEVVRL CGLLPLAVSL AAARLRSRPA WSLERLAAHL
RDSGLDAVRA GSRELRPVFD LSYRDLPAAT ARAFRLLSLH PGRGFTSGAV AALSGTSEGA
ARAALEALVD ENLIEQRTAD RYELHDLLHA YAVERAQIDE SAAEREESLG RLLSWYLHTT
ENVARAVENR RLLETLPTLP SEPAAPRFAS AQEAMAWYDA ERENLSAVLM CAADTGRHDL
ALRLPVTLLG CYQRRKDWAR WRSAYETGLD SAREAGDRTA QGRLYNGLGL VLFDLRAYPQ
AIEVYGEALA LAEEIGSTRQ VASILGNIGD CHCRLGDFGT AETVIRRSLA LFREIGDPQN
LASSLCNYGV LLHEAKRLEE SHATYSEALA ASRKAGNRRF EAIIAFNRAE VCMDQDRPAE
AEEDYRLALT AAQDADDRPT EAEARRSLAR PLRALSRPAE AREALRAALA LFEALGSPEA
AVTRERLAEL GD
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