| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1546 |
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| Symbol | |
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| ID | 8332885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1746932 |
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| End bp | 1747849 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954692 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003112308 |
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| Protein GI | 256390744 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0325177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA AGTGGACCGC CGACGCGATC CCGGCCCTGG CCGGACGCAC GTTCGTGGTC
ACCGGCGCGA ACAGCGGGCT GGGGCTGGAG GCCGCGCGGC TGCTGGCCGG GAACGGAGCG
CATGTGGTGA TGACCGCGCG CAGCCGGACC AAGGGCGAGG CCGCGGCGGC GCGGATCGGG
CAGGACGTAC CGGGCGCATC GCTGGAGCTG CGGACGCTGG ACCTGGCCGA CCTCGACTCG
GTGCGGGAGT TCGCGCGAGG GCTGCACGAG GACGGCGTCG GCGTGGACGT ACTGATCAAC
AACGCCGGCG TGATGATGGC GCCGCAGCAG CAGACCAAGC AGGGCTTCGA GTTGCAGTTC
GGGACCAACC ACCTCGGGCA CTTCGCGCTC ACCGGTTTGC TGCTGGACCT GCTGGCGGCG
GGGAGCGACC CGCGGGTGGT GACCGTCTCC TCGACGTTCC ACAAGCAGGG GTCGATCGAC
TTCGACGACC TGATGCGGAC CAAGGGCTAC AACCCCAACG CCGCCTACGC GCAGTCGAAG
CTGGCGAACC TGTTGTTCGG GCTGGAGTTG CAGCGGCGGC TGAGCGCGGC GGGCTCGCCG
GTGCGCTCGC TGATGGCGCA CCCGGGGTAT TCGGCGACGA ACCTGCAGTT CGCCGTGACG
ACCGGCTGGC GCAAGGCGAT CCTGCGCGTC GGCAACTCGC TGTTCGCGCA GAAGGCGGCG
GTCGGCGTGC TGCCGGAGGT GCGGGCCGCG GTCGCACCGG ATGTGGCGGG CGGGCAGTAC
TACGGCTCGG CCAACTTCTT CGAGACGCGC GGGCATCCGG AGGTGGTGCA GCCGAGCCGG
CGGGCTCAGG ACCCGGAGTT GGCGGCGCGG CTGTGGGAGG AGTCGGAGAA GCTGACGGGG
GTCGTGTACC CGCTCTGA
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| Protein sequence | MSTKWTADAI PALAGRTFVV TGANSGLGLE AARLLAGNGA HVVMTARSRT KGEAAAARIG
QDVPGASLEL RTLDLADLDS VREFARGLHE DGVGVDVLIN NAGVMMAPQQ QTKQGFELQF
GTNHLGHFAL TGLLLDLLAA GSDPRVVTVS STFHKQGSID FDDLMRTKGY NPNAAYAQSK
LANLLFGLEL QRRLSAAGSP VRSLMAHPGY SATNLQFAVT TGWRKAILRV GNSLFAQKAA
VGVLPEVRAA VAPDVAGGQY YGSANFFETR GHPEVVQPSR RAQDPELAAR LWEESEKLTG
VVYPL
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