| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1540 |
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| Symbol | |
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| ID | 8332879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1743622 |
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| End bp | 1744668 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954686 |
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| Product | ABC transporter related |
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| Protein accession | YP_003112302 |
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| Protein GI | 256390738 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.84586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0898029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAGG CTGTCGGGCT CACCAAGCGC TATGGCGAGA AGGTCGCCGT CGACCACGCC
GACTTCTCCG TCGCGGCGGG GACCGTCACC GGGTTCCTCG GGCCGAACGG TGCGGGCAAG
TCCACCACGA TGCGCATGAT TCTGGGGCTG GACCGGCCCA CCGACGGCAC GGTCACGGTC
GACGGCAAGC CTTACCGGAA CCTGCCTGTG CCGCTGCGGG AGGTCGGCGC GCTGCTGGAC
GCCAAGGCGG TGCACGGCGG CCGGACCGCC TACAACCACC TGGCGTGCCT GGCCAAGTCC
AACGGCATCC CGCTGCGGCG GGTCGACGAG GTCATCGGGC TGGTCGGGCT GGAGCAGGTG
GCGAAGAAGC GCTCGAAGAA CTTCTCGCTG GGCATGGGCC AGCGCCTGGG CATCGCCGCG
GCGCTGCTCG GCGATCCGGG CACGCTGCTG TTCGACGAGC CGGTCAACGG CCTGGACCCC
GAGGGCATCC TGTGGGTCCG CAACCTGATG AAGTCGCTGG CGGCGCAGGG CCGCACGGTC
TTCGTCTCCA GCCACCTGAT GAGCGAGATG GCGTTGACCG CCGACCGCGT CATCGTCATC
GGCCGCGGCC AGATCAAGGC CGACACCACG ATGCGCGAGT TCATCGCGCA GAACGCGACC
ACGCACGTCC GCGTCCGCTC CCCGCACATC GGCAAGCTGC GCCAGCTGAT GAGCGGCAAG
GGCTGGCACA CCGAGGCGCT GCCCGACGAC GAGGGCGCGG TGGAGGTCTT CGACGTGACC
TCCGAGGCCG TCGGCGACCT GGCCGGCGAG AACGGCCTGT GGCTGCACGA GTTGGCGGTG
GTCCAGCCGT CCCTGGAGGA GGCGTTCATG AGCATGACGG CCGACAGCGT CGAGTACCAC
GCCGGCGTGC CCGGCATGGC GCCCGGCCAG GTCCTGGGGC AGCCGGGACT GGCTCCGGGC
CAGGTTGAGC CACAAGCCCA GACCAAGCCG CAAACCCGGA CCGAGCCGCA AGCACCGCCC
CCCGGCAGCG GGGAGGCGCA GCGATGA
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| Protein sequence | MIQAVGLTKR YGEKVAVDHA DFSVAAGTVT GFLGPNGAGK STTMRMILGL DRPTDGTVTV
DGKPYRNLPV PLREVGALLD AKAVHGGRTA YNHLACLAKS NGIPLRRVDE VIGLVGLEQV
AKKRSKNFSL GMGQRLGIAA ALLGDPGTLL FDEPVNGLDP EGILWVRNLM KSLAAQGRTV
FVSSHLMSEM ALTADRVIVI GRGQIKADTT MREFIAQNAT THVRVRSPHI GKLRQLMSGK
GWHTEALPDD EGAVEVFDVT SEAVGDLAGE NGLWLHELAV VQPSLEEAFM SMTADSVEYH
AGVPGMAPGQ VLGQPGLAPG QVEPQAQTKP QTRTEPQAPP PGSGEAQR
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