| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1525 |
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| Symbol | |
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| ID | 8332864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1729940 |
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| End bp | 1730923 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644954671 |
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| Product | integrase family protein |
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| Protein accession | YP_003112287 |
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| Protein GI | 256390723 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.206219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00883097 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGACGACG CGTACCGGGC GGCCCTGGAC CGCTTCGAGG AGGATCTGCG GGCGCGCAGG
TTGTCCCCGC ACACGGTGCG TGGCTACGTC GCCGACCTCG TGGACCTGTT CGGTTTCGCC
GAGCGCGCCG GCGTCGCCGA GCCCACGCAG ATCGGGCTGG ACGTCGCAAG GTCCTGGCTC
GCCGAGACGG CCGCGTCCGG AGCGGCCCGA GCGACCCTGG CCCGGCGCAC CGCGGCGGCA
CGCGCGTGGG GACGCCAAGC CTCAACACCG GGCCTGGTCC GCCTGGTGAC CCCGAAGCCA
CGCTCGCCGT TGCCGGCCGT GCTCTCGCAG CGTCAGATGA CCGACGCCCT CACGACAGCC
GCCGACGACG CCGCGACGCA CCCGCACGAT CCGCTGGCAC TCCGAGACTT GGCCATCCTG
GAGTTCCTGT ACGCCACAGC GGCGCGCGTC TCAGAGGTGT GCGCCCTGAA CCTGGACGAC
GTGGACTTCA CACGGCGCAC TGCCCGCCTG TCGGGCAAGG GCGGCCGCGA CCGCACGGTG
CCCTTCGGCG TGCCGGCGGA GCGCGCGCTG CACGCGTGGC TGGCGGCCGA CGCGCGCGGC
GCCGTGCTCG CCGCCGCGCG CGCCAACGGT GCCAGGCGCG CTGGCGCGGC CGCCGCAGCG
GCAGTTGGGT GGGTGGGTGG GGGAGGGGGA ATCCAGAAAA CTGAAACCGA AGCGGTCTTC
CTCGGCGCCC GCGGCTCCCG CATCGACCCC GCCGTGGTCC GCCGCCTCGT CCACGCACGC
CTGCGCGCGA CCCCCAACAC GCCGGACACC GGTCCCCACG GTTTCCGCCA CACCGCCGCG
ACTCACCTGA TCGAGGGGGG CGCGGATCTT CGTGACGTTC AGGAGCTCCT CGGTCACGCT
ACGCTCGCAA CAACCCAGAT CTACACCCAT GTGACGGCAG AGCGGATCAA GGCACGGTAT
GCCCAGTCCC ACCCGCGGGC GTGA
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| Protein sequence | MDDAYRAALD RFEEDLRARR LSPHTVRGYV ADLVDLFGFA ERAGVAEPTQ IGLDVARSWL
AETAASGAAR ATLARRTAAA RAWGRQASTP GLVRLVTPKP RSPLPAVLSQ RQMTDALTTA
ADDAATHPHD PLALRDLAIL EFLYATAARV SEVCALNLDD VDFTRRTARL SGKGGRDRTV
PFGVPAERAL HAWLAADARG AVLAAARANG ARRAGAAAAA AVGWVGGGGG IQKTETEAVF
LGARGSRIDP AVVRRLVHAR LRATPNTPDT GPHGFRHTAA THLIEGGADL RDVQELLGHA
TLATTQIYTH VTAERIKARY AQSHPRA
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