Gene Caci_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1512 
Symbol 
ID8332851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1718465 
End bp1718935 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content69% 
IMG OID644954658 
Productribosomal protein S16 
Protein accessionYP_003112274 
Protein GI256390710 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.819052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.241519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGTCA AGATCAAGCT CAAGCGCATG GGCAAGATCC GGAACCCGCA GTACCGGATC 
ATCGTGGCCG ACGCCCGTAC CAAGCGCGAC GGCCGGGCGA TCGAGGAGAT CGGGAAGTAC
CACCCGAAGG AGGACCCCTC CTACATCGAG GTCACCTCCG AGCGCGCGCA GTACTGGCTG
GGCGTCGGCG CGCAGCCGAC CGAGGCCGTC GAGGCGATCC TGAAGATCAC CGGCGACTGG
CAGAAGTTCA AGGGCCTGGA CGCCCCGGCG CCGATGAAGG TCGCCGCGCC GAAGGCGGAC
CGCAAGGCCG TCTTCGAGGC CGCCGCCAAG GAGGCCGCCG ACGAGCCCAA GACCGGCGCC
ACCACGCCGA AGAAGAAGGC CGAGAAGAAG GCCGACGAGA CCCCGGCGAC CGAGGCTCCG
GTGGAGACCC CGGCCCCGGC CGTCGAGGCT GAGATCGCTT CCGAGGGCTG A
 
Protein sequence
MAVKIKLKRM GKIRNPQYRI IVADARTKRD GRAIEEIGKY HPKEDPSYIE VTSERAQYWL 
GVGAQPTEAV EAILKITGDW QKFKGLDAPA PMKVAAPKAD RKAVFEAAAK EAADEPKTGA
TTPKKKAEKK ADETPATEAP VETPAPAVEA EIASEG