Gene Caci_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1496 
Symbol 
ID8332835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1700043 
End bp1700663 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content72% 
IMG OID644954644 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003112260 
Protein GI256390696 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CCCCGCGCCG CAAGCGTGTA CCCCGCGCCG AACGCGAGCA GCAGATCCTG 
GCCGCCGCCG AGGAGGTCTT CGCCGAGCGC GGGTTCCAGA ACACGTCGAT GGACGAGGTG
TCGCTGCGCG TCGGGGTCTC CAAGCCGATG CTGTACGAGT ACTTCTCCTC TAAAGAAGGA
CTGCTGCTGG CGTGCGTGGC GCGCATCCGT GCGGACCTGC ACAGCGTGAC GCTCAACGCC
GTCTCCGCCG CCGAGCCCGA CGGTCCGCGC GCCGTGCTGG AGGCCGGGTT GGAGGCGTAC
TTCGACTTCG CCGACCGGCA CGGCCGGGCC TGGGCCGTCC TGCTGAACGA GTCGGTGATC
GCCGCCGGTC CCGCCGAGGA GGCCATCGAG GCGATCCGCG GCCAGCAGAC GCGGCTGTTG
GAGGACGTGC TGGGGCACTG GCTGCCCGCG GCGTCCCCGG CGCGCGTGTC GATCCTGGCG
CACGCGCTGG TCGGCGCCGG CGAGCGGGTC GCGCGCTGGC GGCTGCGGGA CGGTTCGGGC
ATCGGGCCGC GCGAGTCCGC CGTGCTGCTC GCTGACGCGT TCTGGCCCGG ATTCGCCGAA
ATGTCGGCGA ACAAGCCGTG A
 
Protein sequence
MTDAPRRKRV PRAEREQQIL AAAEEVFAER GFQNTSMDEV SLRVGVSKPM LYEYFSSKEG 
LLLACVARIR ADLHSVTLNA VSAAEPDGPR AVLEAGLEAY FDFADRHGRA WAVLLNESVI
AAGPAEEAIE AIRGQQTRLL EDVLGHWLPA ASPARVSILA HALVGAGERV ARWRLRDGSG
IGPRESAVLL ADAFWPGFAE MSANKP