Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1432 |
Symbol | |
ID | 8332771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1629568 |
End bp | 1630542 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644954580 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003112196 |
Protein GI | 256390632 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.629194 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGACG TGGCGCGGGT CGCGGGCGTC AGCCTGAAGA CCGTATCGCG GGTGGTGAAC AACGTCCCCA CCGTGGACTC CCAGCTCGTG GCGAAGGTCG ACGCCGCCGT CGCCGAACTC GGCTTCCGCC GCAACGACAT GGCGCGCAAC CTGCGGGCCG GCGGCAGTTC GGCGACGGTG GGCCTGCTCA TCGAGGACCT GGCGAACCCG TTCTACGCGG GCATAGCAGC CGCGGCGGCG CAGTACGCGC TGGACCGCGA CACGCTGCTG ATCACGGCCA GCTCCGAGGA GGACGTCGAC CGGGAGCGCA AGTTGCTGCT GGAGCTGTGC GCGCGGCGGG TGGACGGTCT GCTGGTGGTC CCGGCCGCCG ACGCGGACCA CGTCTACCTG CGCCCGGAGA TCGAGCGCGG CACGCCGATC GTGTTCCTGG ACCGGCCGCC GCGCAACCTG CGCGCGGACA CGGTGCTGAT CGACAACGCG GCCGGCGCCC GCACCGGGAT CGAGCACCTC GTCGCCGAGG GGCACACCCG GATCGGCGTG GTGGCGGACT GGCTGAGCAT CTCCCCGATG GCCGAGCGGC TCGGCGCCGC GGAGAAGGCG TTGGAGCAGG CCGGACTGCC GTATCGGCCG GACCTGATCA CGTCCGGCGT GCACACCGTG CGGGACGCCA CCGCCGCGGT GAACGCGATG CTCGACGGCC CGGAGCCGCC GACCGCGGTG TTCGCGCTGA ACAACCGGCT GGTCCTCGGC GCGCTCAGTG CGGTGCGCGG CCGCGCGGCG GAGGTCGAGC TGGTCGGCTT CGACGACTTC GAGACCGCCG CGTTCGTGCC GTGGCCGCTG ACGGTGGTCT CCTACGACGT CCGCGAGATC GGCCGGATCG GCGCGGAACT GCTGTTCAAC CGCATCGCGG GCGACCGCTC GCGGCCCAAG ACCGTCGTCG TGCCGACGGA GTTGATAGTG CGCAGCGCCG GCTGA
|
Protein sequence | MADVARVAGV SLKTVSRVVN NVPTVDSQLV AKVDAAVAEL GFRRNDMARN LRAGGSSATV GLLIEDLANP FYAGIAAAAA QYALDRDTLL ITASSEEDVD RERKLLLELC ARRVDGLLVV PAADADHVYL RPEIERGTPI VFLDRPPRNL RADTVLIDNA AGARTGIEHL VAEGHTRIGV VADWLSISPM AERLGAAEKA LEQAGLPYRP DLITSGVHTV RDATAAVNAM LDGPEPPTAV FALNNRLVLG ALSAVRGRAA EVELVGFDDF ETAAFVPWPL TVVSYDVREI GRIGAELLFN RIAGDRSRPK TVVVPTELIV RSAG
|
| |