Gene Caci_1432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1432 
Symbol 
ID8332771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1629568 
End bp1630542 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content73% 
IMG OID644954580 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003112196 
Protein GI256390632 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.629194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACG TGGCGCGGGT CGCGGGCGTC AGCCTGAAGA CCGTATCGCG GGTGGTGAAC 
AACGTCCCCA CCGTGGACTC CCAGCTCGTG GCGAAGGTCG ACGCCGCCGT CGCCGAACTC
GGCTTCCGCC GCAACGACAT GGCGCGCAAC CTGCGGGCCG GCGGCAGTTC GGCGACGGTG
GGCCTGCTCA TCGAGGACCT GGCGAACCCG TTCTACGCGG GCATAGCAGC CGCGGCGGCG
CAGTACGCGC TGGACCGCGA CACGCTGCTG ATCACGGCCA GCTCCGAGGA GGACGTCGAC
CGGGAGCGCA AGTTGCTGCT GGAGCTGTGC GCGCGGCGGG TGGACGGTCT GCTGGTGGTC
CCGGCCGCCG ACGCGGACCA CGTCTACCTG CGCCCGGAGA TCGAGCGCGG CACGCCGATC
GTGTTCCTGG ACCGGCCGCC GCGCAACCTG CGCGCGGACA CGGTGCTGAT CGACAACGCG
GCCGGCGCCC GCACCGGGAT CGAGCACCTC GTCGCCGAGG GGCACACCCG GATCGGCGTG
GTGGCGGACT GGCTGAGCAT CTCCCCGATG GCCGAGCGGC TCGGCGCCGC GGAGAAGGCG
TTGGAGCAGG CCGGACTGCC GTATCGGCCG GACCTGATCA CGTCCGGCGT GCACACCGTG
CGGGACGCCA CCGCCGCGGT GAACGCGATG CTCGACGGCC CGGAGCCGCC GACCGCGGTG
TTCGCGCTGA ACAACCGGCT GGTCCTCGGC GCGCTCAGTG CGGTGCGCGG CCGCGCGGCG
GAGGTCGAGC TGGTCGGCTT CGACGACTTC GAGACCGCCG CGTTCGTGCC GTGGCCGCTG
ACGGTGGTCT CCTACGACGT CCGCGAGATC GGCCGGATCG GCGCGGAACT GCTGTTCAAC
CGCATCGCGG GCGACCGCTC GCGGCCCAAG ACCGTCGTCG TGCCGACGGA GTTGATAGTG
CGCAGCGCCG GCTGA
 
Protein sequence
MADVARVAGV SLKTVSRVVN NVPTVDSQLV AKVDAAVAEL GFRRNDMARN LRAGGSSATV 
GLLIEDLANP FYAGIAAAAA QYALDRDTLL ITASSEEDVD RERKLLLELC ARRVDGLLVV
PAADADHVYL RPEIERGTPI VFLDRPPRNL RADTVLIDNA AGARTGIEHL VAEGHTRIGV
VADWLSISPM AERLGAAEKA LEQAGLPYRP DLITSGVHTV RDATAAVNAM LDGPEPPTAV
FALNNRLVLG ALSAVRGRAA EVELVGFDDF ETAAFVPWPL TVVSYDVREI GRIGAELLFN
RIAGDRSRPK TVVVPTELIV RSAG