Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1387 |
Symbol | |
ID | 8332725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1576505 |
End bp | 1577410 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644954535 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003112151 |
Protein GI | 256390587 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGGGA TCTGCGAAGG CCGCGTGGCC GTCGTCACCG GAGCCGGGCG CGGTCTGGGG CGCGCGCACG CCCTGGAGTT CGCGCGGCAG GGCGCCAAGG TCGTGGTCAA CGACCTCGGG GTCGGACCCG ACGGGAGGGA CGGCAGCGAC GCCCCGGCGC AGGAGGTCGT CGCCGAGATC GCGAAGGCCG GCGGCGAGGC GGTCGCCGAC CACCACGACA TCGCCACCTG GGACGGCGCG GCGGGCCTGG TGCGGACCGC CCTGGACGCC TTCGGCCAGC TCGACGTCCT GGTCAACAAC GCCGGCTTCC TGCGCGACCG GATGCTGGTC AACCTCTCGG AGCAGGACTG GGACGACGTG GTCCGGGTTC ACCTCAAGGG CCATTTCCTG ACCCTGCGGC ACGCCGGGGC GCACTGGCGC GACCAGTACA AGTTCGGCAA CCTCAACGAC GCCCGGGTCG TCAACACCAG CTCCGGCGCC GGTCTTCTCG GCTCGGTCGG CCAGGGCAAC TACGCCGCCG CCAAGGCCGG CATCGCCGCG CTGACCATCC AGGCCGCCGC CGAACTCGGC CGCTACGGCG TCACCGTCAA CGCCATCGCC CCGGCGGCGC GCACCCGCAT GACCGAGGGC CCGTTCAGCT CCATGATGGC CGCGCCGGAC TCCGGCTTCG ACGCCATGGC GCCGGAGAAC GTCTCCCCGC TGGTGGTCTG GCTCGGCTCG GACCGCTCCC GGGCGGTCAG CGGCCGAGTC TTCGAGGTCG AGGGCGGCCG GATCGGCGTC GCCGACGGCT GGCAGCACGG CCCGACCGTC GACAAGGGCG CGCGCTGGGA GCCCGCGGAG CTGGACGCGG TGGTGGCCGG ACTGATCGAG CAGGCGCCAG TGCCGGGAGC GGTGTACGGC GCGTAA
|
Protein sequence | MAGICEGRVA VVTGAGRGLG RAHALEFARQ GAKVVVNDLG VGPDGRDGSD APAQEVVAEI AKAGGEAVAD HHDIATWDGA AGLVRTALDA FGQLDVLVNN AGFLRDRMLV NLSEQDWDDV VRVHLKGHFL TLRHAGAHWR DQYKFGNLND ARVVNTSSGA GLLGSVGQGN YAAAKAGIAA LTIQAAAELG RYGVTVNAIA PAARTRMTEG PFSSMMAAPD SGFDAMAPEN VSPLVVWLGS DRSRAVSGRV FEVEGGRIGV ADGWQHGPTV DKGARWEPAE LDAVVAGLIE QAPVPGAVYG A
|
| |