Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1374 |
Symbol | |
ID | 8332712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1561623 |
End bp | 1562684 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644954522 |
Product | phospho-N-acetylmuramoyl-pentapeptide- transferase |
Protein accession | YP_003112138 |
Protein GI | 256390574 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | [TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAGCGC TCCTTTACGC CACCCTCATC GCGCTGGTCT GTTCGCTGGC GGGAACCCCG GTGGCGATCC GGTACTTCAC CCGCCGGGGC TGGGGACAGG AGATCCGCGA CGAGCTCCCG GAGATGCATC AGGTCAAGCG GGGCACGCCG ACGATGGGCG GCACGGTCAT CGTCCTGTCC ACGCTGGTCG CCTACTTCGT GACCAAGCTC GCGACGATGA AGGCGCCGAC GAGCTCGGGC CTGCTGGTCC TGTTCCTGAT GGCAGGCCTC GGCGCGGTCG GATTCATGGA CGACTTCATC AAAATCGTCC GACAGCGCTC GCTGGGATTG CGGGCGCGGG CGAAACTCGC CGGACAGCTG GCCGTGACGC TCACCTTCGC GGTCCTCGTC CTGCACTTCC GCAACACCGC CGGTCTGACG CCGGCGAGCG AGAACATCTC GTTCCTGCGC GACATCGGCT GGCTCAGCCT CGGACCGGCG CTCTTCCTCC TGTGGAGCTA TGTGATGATC GCGGGCTGGT CCAACGCGGT CAACCTCACC GACGGCCAGG ACGGTCTGGC CGCCGGCACC TCGGTCATGG CCTTCGGCGC CTACGTGGTC ATCGGCCTGT GGCAGTACGG ACAGAACTGC GCCGTCTCCC CGAGCCAGGG CTGCTACCAG GTCCGCGACC CGCTGGACCT GGCGATCGTC GCGGCCGCGG TGATGGGCGC CTGCTTCGGC TTCCTGTGGT GGAACGCCGC CCCGGCGCAG ATCTACATGG GAGACACCGG CTCGCTCGCG TTGGGCGGCG CCTTCGCGGG ACTGGCGATC TGCTCGCGGA CCGAACTGCT CGCCGTGCTC ATCGGCGGCC TGTTCCTCAT GGAGCTGCTC TCGGTGGTCA TCCAGGTCAC CTCCTTCAAG CTGCGGCACA AACGGGTGTT CTTGAACTCG CCGATCCACC ACCATTTCGA GCAGAAGGAG TGGAAGGAAG TCACCATCAC GATCCGGTTC TGGATCATCG CAGGGCTCTG TGTGGCGCTG GGTCTCGGTG TGTTCTACGG CGGATTCAAG GCCTCTGCCT GA
|
Protein sequence | MRALLYATLI ALVCSLAGTP VAIRYFTRRG WGQEIRDELP EMHQVKRGTP TMGGTVIVLS TLVAYFVTKL ATMKAPTSSG LLVLFLMAGL GAVGFMDDFI KIVRQRSLGL RARAKLAGQL AVTLTFAVLV LHFRNTAGLT PASENISFLR DIGWLSLGPA LFLLWSYVMI AGWSNAVNLT DGQDGLAAGT SVMAFGAYVV IGLWQYGQNC AVSPSQGCYQ VRDPLDLAIV AAAVMGACFG FLWWNAAPAQ IYMGDTGSLA LGGAFAGLAI CSRTELLAVL IGGLFLMELL SVVIQVTSFK LRHKRVFLNS PIHHHFEQKE WKEVTITIRF WIIAGLCVAL GLGVFYGGFK ASA
|
| |