Gene Caci_1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1305 
Symbol 
ID8332640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1481234 
End bp1482496 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content71% 
IMG OID644954452 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003112071 
Protein GI256390507 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCG CTCAGGACAC GGACAGCATG GTCATCGTCG GCGCGAGCCT GGCGGGCGCC 
AAGGCCGCGC AAGCGCTGCG TGAGGACGGC TGGGACGGAC CGATCGAGCT GGTCGGCGCC
GAATACGACC TGCCCTACGA GCGTCCGCCG CTGTCCAAGG GCTTCTTGCA GGGCAAGGAG
GAGCGGGACA AGGTCTTCGT GCACGAGTCC GGCTCCTGGT ACGTGGAGAA CCAGGTCGGG
CTGCGCCTGG GCCGGACCGC GGCGGCGATC GACCGCGAGC GGCACGTGGT CCGCCTCGAC
GACGGCACCG AACTCCCCTA CGGCAAGCTG CTGCTGGCGA CCGGCTCCTC CCCGCGCCGG
CTCAGCGTCC CCGGCGGCGA CGCGAAGAAC CTGTCCTACT TCCGCACCCT GGAGGACAGC
CAGCGCACCA AGGACCAGCT GATCCCCGGC TCCCGGCTGA CGATCGTGGG CGCCGGCTGG
ATCGGTCTGG AGATCGCGGC GGCGGCGCGC GAGAAGGACG TCGAGGTGAC GGTGCTGGAG
GCGCTGGAGC AGCCGCTGCT GCGGGCGCTC GGTCCCGAGG TCGGCGCGAA GTTCGCCGAG
CTGCACCGCG CGCACGACGT GGACCTGCGC CTGGGCGTCG GCGTGGACTC CTTCACTTTG
CAGGACGTGG ACGGCGTGGA GCAGGCCACC CGGGTCCGGC TCGCCGACGG CACCGAGATC
GAGGCGGACC ACATCCTGGT GGCGGTCGGC GCCGCGCCGA ACACCGCTCT GGCCGAGGCC
GCCGGGCTGG AGGTCGACAA CGGGGTCGTG GTCGACGCCA CACTGCGCTC CTCGGACCCG
GACGTCTTCG CCGCCGGCGA CGTCGCCAGC GCCTGGCACC CCTTCTACGA AGAGGCGATC
CGGGTCGAGC ACTGGGCCAA CGCGCTGAAC CAGCCGAAGG TCGCCGCGGC CTCGATGATG
GGGGTCACCG ACCTGAAGTA CGACCGGCTG CCCTACTTCT TCACCGACCA GTACGACCTC
GGCATGGAGT ACGTCGGGCA CATCCCGTCT TCGGGCTACG ACGAGGTGGT GTTCCGCGGC
GACCCGGGAT CCGGGGCGTA CATGGCGTTC TGGCTGGCCG GCGGCAAGGT GCTGGCCGGG
ATGAACGTCA ACGTCTGGGA CGTGGTCGAC GAGGTGCGGA ACCTGATCCT GGGCCGCAAG
GCGGTCGATC TGACGCGGCT GCGGAACGCG GCGGTGCCGT TGGCCGAGGT GGCGGCTTCC
TGA
 
Protein sequence
MSGAQDTDSM VIVGASLAGA KAAQALREDG WDGPIELVGA EYDLPYERPP LSKGFLQGKE 
ERDKVFVHES GSWYVENQVG LRLGRTAAAI DRERHVVRLD DGTELPYGKL LLATGSSPRR
LSVPGGDAKN LSYFRTLEDS QRTKDQLIPG SRLTIVGAGW IGLEIAAAAR EKDVEVTVLE
ALEQPLLRAL GPEVGAKFAE LHRAHDVDLR LGVGVDSFTL QDVDGVEQAT RVRLADGTEI
EADHILVAVG AAPNTALAEA AGLEVDNGVV VDATLRSSDP DVFAAGDVAS AWHPFYEEAI
RVEHWANALN QPKVAAASMM GVTDLKYDRL PYFFTDQYDL GMEYVGHIPS SGYDEVVFRG
DPGSGAYMAF WLAGGKVLAG MNVNVWDVVD EVRNLILGRK AVDLTRLRNA AVPLAEVAAS