Gene Caci_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1283 
Symbol 
ID8332618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1455758 
End bp1456591 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content70% 
IMG OID644954430 
Productprotein of unknown function DUF74 
Protein accessionYP_003112049 
Protein GI256390485 
COG category[S] Function unknown 
COG ID[COG0393] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA AGATCGCGCA CACCGCCGAG GGCGTGCCCG AGGACGCGAT GCGGCGCCTG 
GCCGAGCTCA AGCCCGGCTC GCCCGGGTCG ATCTTCACCT CGGACCTGTC GGTGAACGAG
TTCCTGCTGG TCAAGGAGGC CGGGTTCCGG CCGCTGGGCC TGGTCCTGGG CTCCTCGATC
TACCACGTCG GGCTGCAGGT CGCGCGCTGG GGCAAGAGCC AGGAGCTGGA CGTCCTGAGC
CAGGCCATGT ACCACGCCCG CGAGCTGGCG ATGTCCCGGA TGGAGGCCGA GGCCGACGCG
CTGGGCGCGG ACGGCATCGT GGGCGTGCGC CTGGAGGTGG AGTTCAAGGA GTTCGGCGCC
GACGTCGCGG AGTTCATCGC GATCGGCACC GCGGTCAAGG ACGACGGCAG CGGCCAGCAC
GGCGAGGTCA CCTGGCGCAA CAACAAGAAC CAGCCCTTCA CCTCGGACCT GTCCGGCCAG
GACTTCTGGA CCCTGATCCG CGCCGGCTAC GCGCCGCTGG GCATGGTCAT GGGCTCGTGC
GTCTACCACA TCGCGCACCA GCGCTTCGGC GCCGCGCTGG GCAACATCGG CAAGAACGTG
GAGCTGGAGC AGTTCACCCA GGCCCTGTAC GACGCCCGCG AACTGGCTAT GGCTCGCATG
CAGGCCGAGG CCGAGGCGCT GCACGCCGAG GGCATCGTCG GCGTCCAGCT GCGCAACCAC
AGCCACACCT GGGGCTCGCA CACCACGGAG TTCTTCGCCC TCGGCACCGC CGTCCGCCCG
CTGCGCCCGG ACCACCAGAT CCAGCGCCCG ACGATGGTCC TGAGCCTGGA CTAG
 
Protein sequence
MADKIAHTAE GVPEDAMRRL AELKPGSPGS IFTSDLSVNE FLLVKEAGFR PLGLVLGSSI 
YHVGLQVARW GKSQELDVLS QAMYHARELA MSRMEAEADA LGADGIVGVR LEVEFKEFGA
DVAEFIAIGT AVKDDGSGQH GEVTWRNNKN QPFTSDLSGQ DFWTLIRAGY APLGMVMGSC
VYHIAHQRFG AALGNIGKNV ELEQFTQALY DARELAMARM QAEAEALHAE GIVGVQLRNH
SHTWGSHTTE FFALGTAVRP LRPDHQIQRP TMVLSLD