Gene Caci_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1281 
Symbol 
ID8332616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1453960 
End bp1454733 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content71% 
IMG OID644954428 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003112047 
Protein GI256390483 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID[TIGR03189] cyclohexa-1,5-dienecarbonyl-CoA hydratase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGT TCGTACGCGT GGAGACTGAC GGAGCGGTGG GCGTTATCCG CCTGGACCGC 
CCGAAGATGA ACGCGCTGAA CGTGCAGGTG CAGCGGGAGC TGCACGAGGC GGCCGGGCAG
GTCGGCGCCG ACGAGGCGAT CCGTGCCGTG GTCATCTGGG GCGGCGAGCG GGTTTTCGCC
GCCGGTGCCG ACATCAAGGA GATGGAGCAG ATGTCCTACG CGGACATGGC GCACCACTCC
GGGCGGCTCC AGGACGCCTT CAAGGCGCTG GCGAACATCC CCAAGCCGGT CATCGCCGCC
ATCACCGGCT ACGCCCTGGG CGGCGGCTGC GAGCTGGCGC TGACCGCCGA CTTCCGGGTC
GCGGCCGAGG ACGCCAAGCT GGGCCAGCCG GAGATCCTGC TCGGCCTGAT CCCCGGCGCC
GGCGGGACAC AGCGGCTGCC GCGGCTGATC GGTCCGGCGC GGGCCAAGGA CCTGATCTTC
TCCGGACGGC AGGTGGACGC CGCCGAGGCG CTGGCCATCG GGCTGGTGGA CCGCGTGGTG
CCGGCCGCCG AGGTGTACAA GACCGCTCTG GAGTGGGCCG GCACTTTCGC GGGCGGTCCG
GCGTTGGCTC TGAAGGCGGC CAAGGAGGCC GTGAACCGCG GGCTGGAGGT GGATGTGGAC
ACTGGTCTGG AGATCGAGCG GCTGCAGTTC ACCGGGACGT TCGCGACCGA GGACCGGACC
GAGGGCATGC GCGCCTTCGT CGCCAAGGAG AAGGCCAGCT TCACCGGGCG CTGA
 
Protein sequence
MGEFVRVETD GAVGVIRLDR PKMNALNVQV QRELHEAAGQ VGADEAIRAV VIWGGERVFA 
AGADIKEMEQ MSYADMAHHS GRLQDAFKAL ANIPKPVIAA ITGYALGGGC ELALTADFRV
AAEDAKLGQP EILLGLIPGA GGTQRLPRLI GPARAKDLIF SGRQVDAAEA LAIGLVDRVV
PAAEVYKTAL EWAGTFAGGP ALALKAAKEA VNRGLEVDVD TGLEIERLQF TGTFATEDRT
EGMRAFVAKE KASFTGR