| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1268 |
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| Symbol | |
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| ID | 8332603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1437552 |
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| End bp | 1439405 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644954415 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_003112034 |
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| Protein GI | 256390470 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.044318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCC TGCGGTCGCG CACCAGCACC CACGGACGCA ACATGGCGGG GGCGCGCGCG
TTGTGGCGGG CCACCGGCAT GGGGGACGAC GACTTCGGCA AACCGATCGT CGCGATCGCC
AACTCCTTCA CCCAATTCGT TCCGGGCCAC GTGCACCTGC GCAACGTCGG CGAGATCGTG
GCCGACGCGG TCAAGGACGC CGGCGGCGTG GCCAAGGAGT TCAACACCAT CGCCGTGGAC
GACGGCATCG CGATGGGCCA CGCCGGCATG CTCTACTCGC TGCCCAGCCG CGAGCTGATC
GCCGACGCGG TGGAGTACAT GGTGAACGCG CACTGCGCCG ACGCGCTGGT GTGCATCTCC
AACTGCGACA AGATCACGCC CGGCATGCTG ATGGCCGCGC TGCGCCTGAA CGTCCCGACG
GTGTTCGTCT CCGGCGGGCC GATGGAGGCC GGCAAGACCA CGGCCATCGA GGGCGTGGTG
CACTCCAAGA TCGACCTGAT CGACGCGATG ATCGCCTCGG CCAACGACGC GGTCACCGAC
GAGCAGCTCG GCGGCATCGA GCGCTCGGCC TGCCCCACGT GCGGCTCCTG CTCGGGCATG
TTCACCGCGA ACTCGATGAA CTGCCTGGTG GAAGCGTTGG GGCTGGGCCT GCCCGGCAAC
GGCTCGGTGC TGGCCACCCA CGAGGCGCGC CGCCAGCTGT TCGAGCGTGC CGGCTCCACG
GTGGTGGAGC TGGCCCGGCG CTACTACGAG GGCGACGACG AGTCGGCCCT GCCGCGCGCG
ATCGCCACCC CGGCCGCGTT CGGCAACGCG ATGGCCCTGG ACGTGGCCAT GGGCGGCTCC
ACCAACACGG TGCTGCACCT GCTGGCCGCC GCGCAGGAGG CCGGCGTCGG CTTCGGGCTC
AAGGACATCG ACCAGGTCTC GCGCCGCGTG CCGTGCATCT CCAAGGTCGC GCCGAGCAGC
CAGTTCCACA TGGAGGACGT GCACCGCGCC GGCGGCATCC CGGCGATCCT GGGCGAGCTG
AACCGCGGCG GGCTGCTGGA CACCGAGGTG CACGCGGTGC ACGCGCCGAC CCTGCAGACC
TGGCTGGAGG AGTGGGACGT GCGCGGCGGC AAGGCCTCCG AGGCCGCGGT CGAGCTGTTC
CACGCGGCGC CCGGCGGGGT CCGCACCGTC GAGCCGTTCT CGACCGCGAA CCGGTGGGCG
AGCCTGGACA CCGATGCCGA GAGCGGCTGC ATCCGGGACC TGGCGCACGC CTACACCAAG
GACGGCGGCC TGGCGGTCCT GTGGGGCAAC CTGGCGGCCG ACGGCGCGAT CGTGAAGACC
GCGGGCGTGG ACGAGAAGAT CTGGGAGTTC GCCGGTCCCG CGCGGGTCTT CGAGTCCCAG
GACGACGCGG TCGAGGCGAT CCTGGCGAAG AAGATCGTCG CCGGCGACGT CATCCTGATC
CGCTACGAGG GTCCCAAGGG CGGGCCGGGC ATGCAGGAGA TGCTGTACCC GACGGCGTTC
CTGAAGGGCA CGGGCCTGGG CGCCAAGTGC GCGCTGGTCA CCGACGGCCG CTTCTCGGGC
GGCACCTCGG GGCTGTCCAT CGGCCACATC TCCCCGGAGG CGGCGTCCGG CGGCGTCATC
GCGCTGGCCG AGGAGGGCGA CATCGTCAAG ATCGACATCG CCACCCGCAG CCTGCACCTG
GACGTCGACC CCGAAGTGCT GGAGGAGCGC CGCGCCAAGC TGCTGGCGGA CCTCGGCGGC
TACCGGCCGC GCGAGCGCGA CCGCCAGGTC TCGGTCGCCC TGCGCGCCTA CGCCGCGCTG
GCCTCCAGCG CCGCCACCGG CGGCGTGCGG GACCTCGGCC AAATCGGCCG GTGA
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| Protein sequence | MPALRSRTST HGRNMAGARA LWRATGMGDD DFGKPIVAIA NSFTQFVPGH VHLRNVGEIV
ADAVKDAGGV AKEFNTIAVD DGIAMGHAGM LYSLPSRELI ADAVEYMVNA HCADALVCIS
NCDKITPGML MAALRLNVPT VFVSGGPMEA GKTTAIEGVV HSKIDLIDAM IASANDAVTD
EQLGGIERSA CPTCGSCSGM FTANSMNCLV EALGLGLPGN GSVLATHEAR RQLFERAGST
VVELARRYYE GDDESALPRA IATPAAFGNA MALDVAMGGS TNTVLHLLAA AQEAGVGFGL
KDIDQVSRRV PCISKVAPSS QFHMEDVHRA GGIPAILGEL NRGGLLDTEV HAVHAPTLQT
WLEEWDVRGG KASEAAVELF HAAPGGVRTV EPFSTANRWA SLDTDAESGC IRDLAHAYTK
DGGLAVLWGN LAADGAIVKT AGVDEKIWEF AGPARVFESQ DDAVEAILAK KIVAGDVILI
RYEGPKGGPG MQEMLYPTAF LKGTGLGAKC ALVTDGRFSG GTSGLSIGHI SPEAASGGVI
ALAEEGDIVK IDIATRSLHL DVDPEVLEER RAKLLADLGG YRPRERDRQV SVALRAYAAL
ASSAATGGVR DLGQIGR
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