Gene Caci_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1256 
Symbol 
ID8332591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1426442 
End bp1427578 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content76% 
IMG OID644954403 
ProductMonogalactosyldiacylglycerol synthase 
Protein accessionYP_003112022 
Protein GI256390458 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCG TGGTCATCTT CTCCGCCTCG GTCGGCGCCG GCCATGACAG CGCCGCCCAG 
GCTCTCGCCG ACCGGCTGAC CGCGCGCGGC TTCGCGGTCG ACCGGCACGA CTTCCTGACG
CTGATGCCCG CCGGGCGCGC GGTGTGCGGC TCCTACCGGC GCATCATCAC GCACGCCCCG
GCGCTGTATC AGTGCATTTA CGCCCGCACC GAGCGCGCCG CGCGCCCCGG GCTGGTGCAG
CGGCAGCTGC TGCGCGGCGC GGAGCAGGCG GTGCTGGACG CGATACCGGC CGACGCGGTC
GCGGCGGTCG CGACGTATCC GCTCGCGGCG CAGGTGCTGG GACGGCTGCG GGCGGCGGGA
CGGCTGGCCG TGCCGGTGGT GGTGACGTTC ACCGACTTCT CCGTGCACCC GCTGTGGATC
GCGCCCGGTG TCGACCTGTA CCTGGCGCCG CACGCGGTGA CGGCGGCGCA GGCGGTCGCG
CACGGTGTGG ACCCGGCGAA GGTCGCGGTG GCGCGGCCGT TGGTGTCGGC GCGGTTCGCC
GAGGGGTCGG CGGCGCGACG GGAGGCGGCG CGGGCGCGGT TCGGGTTGGC AGGGGCGGCA
GGAGCCCGCG AGGACAAGCC GCTGGCGCTG TTGCTCGGCG GCTCGTGGGG CGTCGGCGAC
ATCGAGCAGA CGGCGCGCGA TCTCGCGGCG TCGGGCGTGG TGACGCCGGT GGTGGTGTGC
GGCCGCAACG CGGTGTTGCG GGGACGGCTG CGCGCGGCGG GGTTCCCGCA TGTGTTCGGC
TGGGTCGGGG ACATGCCGAC GCTGATGGCG GCGTGCGACG TCATGGTGCA GAACGCCGGC
GCCTCCAGCA CGCTCGAGGC GTTCGCCACC GGGCTGCCGG TCGCCACCTA CCGCAGCCTG
GTCGGGCACG GCCGGACCAA CGCCGCGGTG CTGGACGAAG CAGGGCTCGC GGTCTGGGTG
CGGTCGCGGG AGGAGCTGGC CGGCTCGCTG CTGGAGCTGA CGTCCGGAGT GCGGGGGCGG
CGCCAGCACA ACGCCGGGCT GGCGATGGTC GGCGGCGGCG CCGAGCCGGA CGCGCTGATC
ATGGAGCTGA TCGCGGAGCT GTCCGCGGAC GCCTCCGTCG GGGCGGTGGC GGTCTGA
 
Protein sequence
MSRVVIFSAS VGAGHDSAAQ ALADRLTARG FAVDRHDFLT LMPAGRAVCG SYRRIITHAP 
ALYQCIYART ERAARPGLVQ RQLLRGAEQA VLDAIPADAV AAVATYPLAA QVLGRLRAAG
RLAVPVVVTF TDFSVHPLWI APGVDLYLAP HAVTAAQAVA HGVDPAKVAV ARPLVSARFA
EGSAARREAA RARFGLAGAA GAREDKPLAL LLGGSWGVGD IEQTARDLAA SGVVTPVVVC
GRNAVLRGRL RAAGFPHVFG WVGDMPTLMA ACDVMVQNAG ASSTLEAFAT GLPVATYRSL
VGHGRTNAAV LDEAGLAVWV RSREELAGSL LELTSGVRGR RQHNAGLAMV GGGAEPDALI
MELIAELSAD ASVGAVAV