| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1248 |
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| Symbol | |
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| ID | 8332583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1415124 |
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| End bp | 1415627 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644954395 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003112014 |
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| Protein GI | 256390450 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.574937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGCCG AGGAAGAGGC GGAGTTCCGC GAGTACGTGG CCGGCCGCTG GACATGGCTG
GTGCAAGCCG CGGCGCTGCT CACAGGGGAC GCCGGGCACG CCGAGGACCT GGCGCAGACA
GCGCTGGTGC GGGTGTTCGC TTCGTGGGCG CGCGTGCGCG GCGCGGAGAG CATGGACGCC
TACACCATGC GGATCCTGAT CAACCAGAAC AAGAACCGCT TCCGGAAGCG GCGCGTTGTG
GAGGATCTCA CCGCTGTCCC GCCCGAGCGC GGAAGCGGTG ATCCGGATCT GACAGCGCGG
GTCGATCAGC GGGCCGGCTT GATGGCGGCG CTGGCGTCGC TCCCCAAGCG GCAGCGCGAG
GTCGTGGTGC TGCGGTACTG GGAGGACTAC AGCGAGGCGC AGACCGCGCA GATTCTCGGC
TGTTCGGTCG GCACGGTGAA GAGCCAGTCG TCCAAGGCGC TGGCCAAATT GCGGGCGCAT
GCCTCGGTGC TCGCCTCGCG CTGA
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| Protein sequence | MRAEEEAEFR EYVAGRWTWL VQAAALLTGD AGHAEDLAQT ALVRVFASWA RVRGAESMDA
YTMRILINQN KNRFRKRRVV EDLTAVPPER GSGDPDLTAR VDQRAGLMAA LASLPKRQRE
VVVLRYWEDY SEAQTAQILG CSVGTVKSQS SKALAKLRAH ASVLASR
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