Gene Caci_1209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1209 
Symbol 
ID8332544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1365537 
End bp1366886 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content70% 
IMG OID644954356 
Productglycosyl transferase family 4 
Protein accessionYP_003111975 
Protein GI256390411 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGAGT ACCTGCTCGC CATGACGGTG GCACTGGCGG TGACCCTTCT CCTCGGCGGC 
CCGATCCGGG CGCTGGCCAT CCGGCTCGGG CTGGTGCCGG TGATCCGCGA GCGCGACGTG
CACGTGACCC CGACGCCGCG CGTCGGAGGC CTGGCGATGT TCATCGGGCT GGCCGCGGCG
CTGACCGCGG CCGAGCACTT CCCGATGCTG GAGCGGGACG TCTACGGCGA GTCCAACACC
ATCCAGGCGC TGCTGTGGGG CGGCTTCCTG GTGGTGCTGC TGGGCATGGT GGACGACAAG
TTCGAGCTGG ACCCGCTGAC CAAGTTCGCC GGCCAGATCT TCGCCGCCTC GGTGATGGTG
GTGAAGGGGA TCCAGATCAG CTGGCTGGTG ATCCCCGGCA TCGGCATCGT GGCCGTGGAC
CCCACGCTGT CCATCGTGCT GTCGGTGTTC CTGGTGCTGG CGCTGATGAA CGCGGTGAAC
TTCGTCGACG GCATCGACGG GCTGGCCGCC GGCGTCAGCG GGATCGCCGC GCTGTCCTCC
TTCGCCTACT GCTACCGGCT GGCCATCAGC TACAAGCTCA CCGGCGCCAC CGCCCCGGCG
CTGATCGCGA TCGTCACGGT CGGGATCTGC CTGGGCTTCC TGGCCCACAA CTGGGACCCG
GCCCGGATGT TCATGGGCGA CACCGGCTCG ATGCTGCTGG GCATGCTGCT GGCCGCCACC
TCGATCGCCA TCATGGGCGG CATCGACCCC TACCAGCTCG GCGCCGGCGT CAGCCAGACC
ACCTCGGTCC ACAAGCTGGT CCCGGCCTAC CTGCCGCTGA TCATGCCGGT CTCGGTGACC
CTGCTGCCGA TCGCCGACAT GGTGATGGCG GTGGTGCGGC GCACCAAGGC CGGCCTGTCC
CCGCTGGCTC CGGACAAGGG CCACCTGCAC CACCGGATGC TGCAGATCGG GCACTCCAAG
CGCCGCGCGG TGCTCATCAT GTACTTCTGG TCGGCGCTGG TGGCGTTCGT CACCGTGCTG
TTCGCCGTGA CGCCGTCCCG GCAGCCGATC GTCTACGGCG CCATAGCGAT GACGCTGGTG
GGACTGCTGA TGCTGCTGGG ACCTCGGCTC GGCGACCACC GGGAGCGGCT GCGGAACAAG
GCGCTGCGCG TGGGCTCCTC GACCACGGCC CGGCACCGCG CGAACACCGG TGGTGCCGCC
GGTGCCGCCG GAACCGCCGC GCCGGAGGGC GCTCTGTCGC AGGGTTCGAC GGTCGAGGCG
GCCATCCCGG CCATAGCGGC CTCGACGGAG AACGGGGTCG ACCGCGCCGA TCCCGACGGC
GGCATGCGGC ACCGTACTTT GTCACGTTGA
 
Protein sequence
MREYLLAMTV ALAVTLLLGG PIRALAIRLG LVPVIRERDV HVTPTPRVGG LAMFIGLAAA 
LTAAEHFPML ERDVYGESNT IQALLWGGFL VVLLGMVDDK FELDPLTKFA GQIFAASVMV
VKGIQISWLV IPGIGIVAVD PTLSIVLSVF LVLALMNAVN FVDGIDGLAA GVSGIAALSS
FAYCYRLAIS YKLTGATAPA LIAIVTVGIC LGFLAHNWDP ARMFMGDTGS MLLGMLLAAT
SIAIMGGIDP YQLGAGVSQT TSVHKLVPAY LPLIMPVSVT LLPIADMVMA VVRRTKAGLS
PLAPDKGHLH HRMLQIGHSK RRAVLIMYFW SALVAFVTVL FAVTPSRQPI VYGAIAMTLV
GLLMLLGPRL GDHRERLRNK ALRVGSSTTA RHRANTGGAA GAAGTAAPEG ALSQGSTVEA
AIPAIAASTE NGVDRADPDG GMRHRTLSR