Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1164 |
Symbol | |
ID | 8332499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1308299 |
End bp | 1308910 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644954312 |
Product | SNARE associated Golgi protein |
Protein accession | YP_003111931 |
Protein GI | 256390367 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATT GGCTCAGCAG CCTGCCGCCT GCGCTGATCT ATGTCGTGGT GGCGCTGCTG GTGTTCGCTG AGGACGCGCT GTTCGTCGGC TTCGTGTTCC CGGGGGAGAC GGCGGCGGTG ATCGGCGGGG TGCTGGCGAA CCGGGGGACG GTGTCCATCT GGGTGCTGGC GACCGTGGTG GTGGTCGCGG CGATCGCGGG GGACAGCGTC GGCTTCGAGG TGGGGCGGCA CTACGGCGTG CGGCTGCTGG ACGTCGGGGT CCTGCGACGG CACAAGGTAC GGATCGACAA GGCCCGGCAG CTGATCCGGC GCCGCGGGCC CGAGGCGGTG TTCCTCGGAC GGTTCGTGTC CTTCTTCCGG GCCCTGATGC CGCCTCTGGC CGCCATCTCC CGCACCCCCT ACCGGAAGTT CCTGCTCTTC AACGCCCTCG GCGGTCTGGT GTGGGGCGTC GGCTTCACTC TGTTGGGCTA CTTCGCCGGC GCCGCCTACT CGCGCGTGGA GCACCTCGTC GGCGGGATCC TCGCCGGGGT CGTCGCGCTG ATCGTGATCG TCGGGCTGAT CGTGTGGCGC GTCCGGCGCG GCAGAGCGGA GCGTGCCGAG GAGGAGGGCT GA
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Protein sequence | MLDWLSSLPP ALIYVVVALL VFAEDALFVG FVFPGETAAV IGGVLANRGT VSIWVLATVV VVAAIAGDSV GFEVGRHYGV RLLDVGVLRR HKVRIDKARQ LIRRRGPEAV FLGRFVSFFR ALMPPLAAIS RTPYRKFLLF NALGGLVWGV GFTLLGYFAG AAYSRVEHLV GGILAGVVAL IVIVGLIVWR VRRGRAERAE EEG
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