Gene Caci_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1160 
Symbol 
ID8332495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1305017 
End bp1305847 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content65% 
IMG OID644954308 
Product2,5-didehydrogluconate reductase 
Protein accessionYP_003111927 
Protein GI256390363 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATACA TCACTTTGAA TGACGGCGTT CAGATCCCGC AGGTGGGTTT GGGCGTCTGG 
CGGGTCTCCG ACGCTGAGGC CTACGGCGCG GTCACGACGG CTCTCGAAGC CGGTTACCGC
CACGTCGACA CCGCCGCCGC CTACGAGAAC GAGGGCGGCG TCGGCCGCGC GATCCGGGAC
TCCGGCATCC CGCGCAAGGA CGTGTTCCTC ACCACCAAGC TCTGGAACGG CGACCACGGC
TACGACGCCG CGCTCCGCGC CTTCGACAAG AGTCTGGAGC GCCTCGGCAC CGAGTACGTG
GACCTGTATT TGATTCACTG GCCGGTCCCG GAACAGGATT TGTATATCGA AAGCTGGCGT
GCCCTGGAGA AGATCCACTC CGACGGCCGG GCCCGCGCGA TCGGCGTCTC CAACTTCTCC
GCCGAGACCT TGGAGCGCCT GGTCAAAGAG TCCAAGAAGG TCCCCTCGAT CAACCAGATC
GAACTCCATC CCTACTTCTG CCAGCCCGCG ATGCGCCAGC TGAACGAGAA GCTCGGCATC
GTCACCGAGG ACTGGAGTCC GCTGGGTCAG GGCGGCGACC TGCTCCAGGA GCCGGTGCTG
ACGCGCATCG GCGACGCCAA AGGCAAGACC GCGGCGCAGG TCGTGCTCCG CTGGCACATT
CAGCTCGGCG ACGTCGTGAT CCCGAAGTCG GTCACCGCCT CGCGCATCGT GGAGAACATC
GACGTCTTCG ACTTCGAACT CACCAGCGCC GAGATGGACG AGATCACGGA GCTGCGGCGG
GACGACGGCC GGATCGGGCC GGATCCGGAC CACTTCAATT ATGTGGGGTG A
 
Protein sequence
MQYITLNDGV QIPQVGLGVW RVSDAEAYGA VTTALEAGYR HVDTAAAYEN EGGVGRAIRD 
SGIPRKDVFL TTKLWNGDHG YDAALRAFDK SLERLGTEYV DLYLIHWPVP EQDLYIESWR
ALEKIHSDGR ARAIGVSNFS AETLERLVKE SKKVPSINQI ELHPYFCQPA MRQLNEKLGI
VTEDWSPLGQ GGDLLQEPVL TRIGDAKGKT AAQVVLRWHI QLGDVVIPKS VTASRIVENI
DVFDFELTSA EMDEITELRR DDGRIGPDPD HFNYVG