Gene Caci_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1114 
Symbol 
ID8332449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1256986 
End bp1257846 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content69% 
IMG OID644954262 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003111881 
Protein GI256390317 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0902731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.962511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTCA CGATGAGCAA CGGCGTCCGG CTGGCTTATG ACGAGGCCGG GACCGCGGGC 
GCCGGTCCGG CGGTGGTGAT GACGCACGGC GGCTTGGCCG ATCGACGCAT GTGGGACCAC
CAGTTCCACG CGTTGGCGGA GCACTGCCGC GTGGTGCGTT ACGACATGCG CGGGCTCGGC
GAGTCCGAGG ATTCGCGCGG CGCGTTCGCC CGCTGCGACG ACCTGCTGGG CCTGCTGGAC
GCGCTCGACA TCGAGCGGGC GATCCTCGTC GGCAACTCCA TCGGCGGCGC GCACTCCATC
GAAGCCGCGC TGTCGGCGCC GGAGCGGGTC AGCGGACTCG CGCTGATCTG CTCCGGCCTG
ACCGAATACG ACTGGCCCGC GGAGATGACC ACCGAAGTCG GGCACCTCAT CGGCGACCGC
GTGCCGCCCG AGCGCCTCGC CCGCTACTGG GACCGGAGCG CCGAGTCGAT CGACCCGGCC
GACGTCGCGG TACTCGCCGA GGTCAACGTC AGCTACATGG TCGCCGGACC GAAGCGGAGC
CTGCAGGACC TGGATCCGGC GGTGCGCGAG CTGGCGCTGG AGATGTGCCG CAACAACTTC
ATGCGCGATT GGAGCGTTCC GCAGTACCAG GAACGCTTTC TGCAGCCGCC GATCATCGAC
CGGCTGCGCG ACATCGCCGT GCCGACGCTG ATCGTGAACG GCGTCCACGA CCCCTCAGCC
ATCCAGGAGA TCGCCGACCT GATGGCGGTG CGGATTCCGC GGGTGACACG CGTCGATCTG
GAGGCCGGGC ATTTGCCTCC GATGGAGGCT CCGGAGGAGA CGACGCGGGT GTTGCTGGAG
TTCATCGCCG CGCTTTTGTA G
 
Protein sequence
MPFTMSNGVR LAYDEAGTAG AGPAVVMTHG GLADRRMWDH QFHALAEHCR VVRYDMRGLG 
ESEDSRGAFA RCDDLLGLLD ALDIERAILV GNSIGGAHSI EAALSAPERV SGLALICSGL
TEYDWPAEMT TEVGHLIGDR VPPERLARYW DRSAESIDPA DVAVLAEVNV SYMVAGPKRS
LQDLDPAVRE LALEMCRNNF MRDWSVPQYQ ERFLQPPIID RLRDIAVPTL IVNGVHDPSA
IQEIADLMAV RIPRVTRVDL EAGHLPPMEA PEETTRVLLE FIAALL