Gene Caci_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1102 
Symbol 
ID8332437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1245577 
End bp1246200 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content72% 
IMG OID644954250 
Productdihydroxyacetone kinase, L subunit 
Protein accessionYP_003111869 
Protein GI256390305 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2376] Dihydroxyacetone kinase 
TIGRFAM ID[TIGR02365] dihydroxyacetone kinase, phosphoprotein-dependent, L subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATCC ACCTCACCCG GGCCTGGGTG CAGGCCATAG CCGCGGCGAT GGACCAGCAC 
AAGGACCACC TGACCCAGCT GGACTCGGCC ATCGGCGACG CCGACCACGG CGTGAACATG
CAGCGCGGCT TCACCGCCGT CGTGGCCGCC CTGGACGGCT ACGAGGCGGT CGGCGTCGGC
GACGTGCTCG TCAAGACCGG GACCACGCTG ATCTCGAAGG TCGGCGGCGC CGCCGGTCCG
TTGTACGGGA CGTTCTTCCG CAACGCCGGC AAGCAGTTGT CCGGACCGAC CGCCGACGCC
GAGCAGCTTT CGGCGGCCTT CGACGCCGGA CTCGCCGGCG TGCAGAAGCT CGGCGCCGCG
GTGCCCGGTG ACAAGACGAT GGTCGACGCC CTCGTGCCCG CACTCGATGC GTTCGGCGCC
GCCGCGCGCG CCGGCGAGAG CGACGCCGCG GCCGCGGAGA AGGCTGCGGC AGCCGCTGAG
ACCGGCATGC AGGACACCAC TCCCTTGCAG GCCCGCAAGG GACGCGCTTC CTACTTGGGC
GCACGCAGCA TCGGACACCA GGATCCCGGC GCCACCTCCA CCGCGCTGGT CTTCCGAGCC
CTTGCCGAGG TGCTGCAGTC GTGA
 
Protein sequence
MDIHLTRAWV QAIAAAMDQH KDHLTQLDSA IGDADHGVNM QRGFTAVVAA LDGYEAVGVG 
DVLVKTGTTL ISKVGGAAGP LYGTFFRNAG KQLSGPTADA EQLSAAFDAG LAGVQKLGAA
VPGDKTMVDA LVPALDAFGA AARAGESDAA AAEKAAAAAE TGMQDTTPLQ ARKGRASYLG
ARSIGHQDPG ATSTALVFRA LAEVLQS