| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1055 |
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| Symbol | |
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| ID | 8332390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1199639 |
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| End bp | 1200142 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644954203 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003111822 |
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| Protein GI | 256390258 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.395851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGATG ACCGGCAGGC GTTTCAGGAT TTCACTGCCG CACACGGGGC CCGACTCTTC
CGTACCGCGT ACTTCCTGGC CGGCGGCGAC TGGCACCTTG CCGAGGACCT CACCCAAGAG
GCCCTCGTCA AGGTGTTCGT GGCGTGGCGC AGGGTCAGCC GGGTCGAGAA CCCCGCTGCC
TACGCGCAGA CCGTCCTCAC GCGCACCTTC ATCAGCCAGC GCCGCCGGAA GCGCTCGACG
GAGCAGCCGA TCGCCGAGCC GCCGGAGCGG GGCATCGAGG ACGTCGATTC CGCGGTGCGG
CTGACGCTGC TCGCGGAGCT GGCGAATCTG TCCGTCAGGG ACCGGGCCGT GGTCGTGCTC
CGGTATTGGG AGGACCTCAG TGTCGAGGAG GTCGCGTCGG TCCTGAACAT CAGCTCCGCC
TCCGTGCGTA CTCAGTCCTC GCGAGCCCTC GGCCGATTGC GCGTCGCGCT CGGCGAGGTG
TTCCCCGAAC GACTCCTCGG CTGA
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| Protein sequence | MKDDRQAFQD FTAAHGARLF RTAYFLAGGD WHLAEDLTQE ALVKVFVAWR RVSRVENPAA
YAQTVLTRTF ISQRRRKRST EQPIAEPPER GIEDVDSAVR LTLLAELANL SVRDRAVVVL
RYWEDLSVEE VASVLNISSA SVRTQSSRAL GRLRVALGEV FPERLLG
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