| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0964 |
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| Symbol | |
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| ID | 8332298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1103676 |
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| End bp | 1104701 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644954117 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_003111737 |
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| Protein GI | 256390173 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.595577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTATCG CACAGCGCCC CACCCTGACC GAGGAAATCA TCGATGAGTA CCGCTCGCGG
TTCCTCATCG AGCCGCTGGA GCCGGGCTTC GGCTACACCC TCGGCAACTC GCTGCGCCGG
ACGCTCCTGT CGTCCATCCC CGGCGCGGCT GTGACGTCCA TCCGGATCGA CGGCGTGCTC
CACGAGTTCA CGACGATCCC GGGTGTGAAG GAAGACGTCA CCGACCTCAT CCTGAACATC
AAGCAGCTGG TCGTCTCCTC GGAGATCGAC GAGCCGGTGA CCATGTACCT GCGCAAGCAG
GGCCCGGGCA CCGTCACCGC CGCCGACATC GCCCCGCCGG CCGGCGTCGA GGTCCACAAC
CCCGAGCTGA TCATCGCCAC GCTCAACGGC AAGGGCAAGC TCGAGATGGA GCTCACCGTC
GAGCGCGGCC GCGGCTACGT CAGCGCGGTG CAGAACAAGC AGGCGGGCCA GGAGATCGGG
CGCATCCCGA TCGACTCGAT CTACTCCCCG GTGCTGAAGG TCAAGTACGA CGTCGAGGCC
ACCCGCGTCG AGCAGCGGAC CGACTTCGAC CGCCTGGTGC TGGACGTGGA GACCAAGCAG
TCGATGCGCC CGCGCGACGC CGTCGCCTCG GCCGGCAAGA CCCTGGTCGA GCTGTTCGGT
CTGGCCCGCG AGCTGAACAT CGAGGCCGAG GGCATCGACA TGGGCCCGTC CCCGACGGAC
GCCGCCCTGG CCGCCGACCT GGCGCTGCCG ATCGAGGACC TGGAGCTGAC CGTCCGCTCC
TACAACTGCC TCAAGCGCGA GGGCATCCAC ACGGTCGGCG AGCTCGTCGC CCGCAGCGAG
GCCGACCTGC TGGACATCCG CAACTTCGGC GCGAAGTCCA TCGACGAGGT CAAGGTCAAG
CTGATGAGCA TGGGCCTGGC GCTGAAGGAC TCCCCGCCCG GATTCGACCC CTCGCTCGTG
GTGGACAACC AGTACGACGA GGAAGAGGAC CTGGACTCCG GTTACGCGGA GACCGAGGAG
CTGTAA
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| Protein sequence | MLIAQRPTLT EEIIDEYRSR FLIEPLEPGF GYTLGNSLRR TLLSSIPGAA VTSIRIDGVL
HEFTTIPGVK EDVTDLILNI KQLVVSSEID EPVTMYLRKQ GPGTVTAADI APPAGVEVHN
PELIIATLNG KGKLEMELTV ERGRGYVSAV QNKQAGQEIG RIPIDSIYSP VLKVKYDVEA
TRVEQRTDFD RLVLDVETKQ SMRPRDAVAS AGKTLVELFG LARELNIEAE GIDMGPSPTD
AALAADLALP IEDLELTVRS YNCLKREGIH TVGELVARSE ADLLDIRNFG AKSIDEVKVK
LMSMGLALKD SPPGFDPSLV VDNQYDEEED LDSGYAETEE L
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