Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0951 |
Symbol | |
ID | 8332285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1092201 |
End bp | 1093547 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644954104 |
Product | preprotein translocase, SecY subunit |
Protein accession | YP_003111724 |
Protein GI | 256390160 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.830582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCACCG CATTCGCTCG GGCGTTCCGT ACGCCCGACC TGCGCAAGAA GCTGCTCTTC ACGCTCGGCA TCATGGCCCT GTTCCGTTTG GGCGCCCACA TCCCGGCGCC GGGCGTGGAC ACCAAGGCGT TGAGCGCGTG TGTGGGGATC AGCAAGGCCA GCGGCCAGGG CAACGGGGCG CTGGGTCTGA TCAACCTGTT CTCCGGCGGG GCGCTGCTGC AGCTGTCGAT CTTCGCGCTG GGCATCATGC CCTACATCAC GGCCTCGATC ATCCTGCAGC TGCTGACCGT GGTGATCCCG CGCCTGGAAG CCCTCAAGAA GGAGGGCCAG GCCGGCCAGA CGAAGATCAC GCAGTACACC CGGTACCTGA CCATCGGGCT GGCGATCCTG CAGTCCACCA CGATGCTCAC GCTGATGAAG AACAACCCGT CGGCCCTGCT GGGCCCGGGC TGCTCCGGCA CGAACGTGAT CTTCCAGAAG GTGGACTGGA TCGGGATGGC CGTCATGGTC ATCACGCTGA CCGCGGGCAC GACGCTGATC ATGTGGCTCG GCGAGCTGAT CACCGACCGC GGCATCGGCA ACGGCATGTC GCTGCTGATC TTCACCTCGA TCACCGCGAA CTTCCCGTCC TCCCTGTGGT CGATCAAGCA GGGCTCCACC ACCATGGACG GCTGGCCGGT GTTCTTCGGC GTGCTCCTGA TGGGCATGCT GCTGGTCGGT CTGGTGGTCT TCGTCGAGCA GGGCCAGCGC CGGATCCCGG TGCAGTACGC CAAACGCATG GTCGGACGGC GCATGTACGG CGGCTCCTCG ACCTACATCC CGATGAAGGT GAACCAAGCC GGCGTCATCC CGGTCATCTT CGCCTCCTCG CTGCTGCAGC TGCCGCTGAT GGTCGCGAAC TTCACGAACC CGAACGCCAC CAAGGGGTGG GCGCACTGGG TGAACCGCGA GTTCGGCATG ACCACGAACG GCTACTCGCT GGCGTACTCG GTGACCTACT TCCTGCTGAT CCTGGGCTTC GCGTTCTTCT ACGTCTCGAT CACCTTCGTC CCCGACGAGA TCGCCGACAA CATGAAGAAG TACGGCGGCT TCATCCCCGG CATCCGCGCC GGCAAGCCGA CCGCCGAGTA CCTGCAGTAC GTCTCCACCC GCGTCACCTG GCCCGGCGCC CTGTACCTGG CGGTGATCGC GATCATCCCG ATGATCGCCC TGGCCGAGTT CCACGCCAGC GGCAAGTTCC CCTTCGGCGG CACGACCATC CTGATCATGG TCGGCGTCGG CCTGGAGACC GTGAAGCAGA TCGAGTCCCA GCTCCAGCAG CACAACTACG AAGGCTTCCT GCGGTGA
|
Protein sequence | MLTAFARAFR TPDLRKKLLF TLGIMALFRL GAHIPAPGVD TKALSACVGI SKASGQGNGA LGLINLFSGG ALLQLSIFAL GIMPYITASI ILQLLTVVIP RLEALKKEGQ AGQTKITQYT RYLTIGLAIL QSTTMLTLMK NNPSALLGPG CSGTNVIFQK VDWIGMAVMV ITLTAGTTLI MWLGELITDR GIGNGMSLLI FTSITANFPS SLWSIKQGST TMDGWPVFFG VLLMGMLLVG LVVFVEQGQR RIPVQYAKRM VGRRMYGGSS TYIPMKVNQA GVIPVIFASS LLQLPLMVAN FTNPNATKGW AHWVNREFGM TTNGYSLAYS VTYFLLILGF AFFYVSITFV PDEIADNMKK YGGFIPGIRA GKPTAEYLQY VSTRVTWPGA LYLAVIAIIP MIALAEFHAS GKFPFGGTTI LIMVGVGLET VKQIESQLQQ HNYEGFLR
|
| |