Gene Caci_0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0945 
Symbol 
ID8332279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1088712 
End bp1089110 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content65% 
IMG OID644954098 
Productribosomal protein S8 
Protein accessionYP_003111718 
Protein GI256390154 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.26193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA CCGACCCGAT CGCGGACATG CTCACCCGTC TGCGGAACGC CAACTCGGCG 
TACCACGACC AGGTGACCAT GCCGTCGAGC AAGATCAAGA CGCACATCTG CGAGATCCTC
AAGCAGGAGG GCTACATCGC CTCCTGGAAG GTCGAGGACG CGGAGGTGGG CAAGTCCCTC
ACCATCGAGC TGAAGTTCGG CCCGAACCGT GAGCGCTCCA TCGCGGGCAT CAAGCGCATC
TCGAAGCCGG GTCTGCGCGT GTACGCCAAG AGCACCGGCT TGCCGAAGGT CCTCGGCGGC
CTCGGTGTCG CCATCATCTC GACTTCGACC GGTCTGCTGA CCGACCGCCA GGCCGCCCGC
AAGGGCGTCG GCGGCGAAGT CCTCGCCTAC GTCTGGTAA
 
Protein sequence
MTMTDPIADM LTRLRNANSA YHDQVTMPSS KIKTHICEIL KQEGYIASWK VEDAEVGKSL 
TIELKFGPNR ERSIAGIKRI SKPGLRVYAK STGLPKVLGG LGVAIISTST GLLTDRQAAR
KGVGGEVLAY VW