Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0934 |
Symbol | rplB |
ID | 8332268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1083629 |
End bp | 1084465 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954087 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_003111707 |
Protein GI | 256390143 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0813346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATCC GTAAGTACAA GCCGACGACC CCGGGCCGTC GCGGCTCCTC GGTCGCCGAC TTCGTCGAGA TCACCCGGAG CACCCCGGAG AAGTCGCTGG TCGTCCCGGT CCACAGCAAG GGCGGTCGCA ACAGCACCGG CCGTGTGACC GTGCGCCACC AGGGCGGCGG GCACAAGCGC GCCTACCGTC TGATCGACTT CCGCCGCAAC GACAAGGACG GCGTGCCGGC CAAGGTCGCT CACATCGAGT ACGACCCCAA CCGCACCGCC CGCATCGCGC TGCTGCACTA CGCGGACGGC GAGAAGCGCT ACATCCTGGC CCCGAAGAAC CTGGGCCAGG GCGACCGGAT CGAGAACGGT CCCGGCGCGG ACATCAAGCC CGGCAACAAC CTGCCGCTGC GCAACATCCC GACCGGTACC ACGATCCACG CGATCGAGCT CCGGCCCGGC GGTGGCGCGA AGATCGCCCG CTCCGCGGGT GCCAGCGTCC AGCTCGTGGC CAAGGACGGT CCGTTCGCGC AGCTGCGCAT GCCCTCCGGC GAGATCCGCA ACGTCGACCT GCGCTGCCGC GCCACGGTCG GCGAGGTCGG CAACGCCGAG CAGTCGAACA TCAACTGGGG CAAGGCCGGC CGCATGCGCT GGAAGGGCAA GCGCCCGACC GTCCGCGGTG TCGCGATGAA CCCGATCGAC CACCCGCACG GCGGTGGCGA GGGCAAGACC TCCGGAGGCC GCCACCCGGT GTCCCCGTGG GGTCAGAAGG AAGGCCGCAC CCGCAAGCCG GGCAAGGCCT CCGACAAGTA CATCGTCCGC CGCCGCAAGT CCAACAAGAA GCGCTAG
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Protein sequence | MGIRKYKPTT PGRRGSSVAD FVEITRSTPE KSLVVPVHSK GGRNSTGRVT VRHQGGGHKR AYRLIDFRRN DKDGVPAKVA HIEYDPNRTA RIALLHYADG EKRYILAPKN LGQGDRIENG PGADIKPGNN LPLRNIPTGT TIHAIELRPG GGAKIARSAG ASVQLVAKDG PFAQLRMPSG EIRNVDLRCR ATVGEVGNAE QSNINWGKAG RMRWKGKRPT VRGVAMNPID HPHGGGEGKT SGGRHPVSPW GQKEGRTRKP GKASDKYIVR RRKSNKKR
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