Gene Caci_0932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0932 
Symbol 
ID8332266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1082644 
End bp1083297 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content70% 
IMG OID644954085 
Productribosomal protein L4/L1e 
Protein accessionYP_003111705 
Protein GI256390141 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.106023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGG TTGTCTCCGT CGACCTCCCC GGCGAGATCT TCGACGTCCA GACCAACATC 
CCGCTGATCC ACCAGGTCGT GGTGGCCCAG CTGGCGGCGG CCCGTCAGGG CACGCACAAG
ACCAAGACCC GGGGCGAGGT GTCCGGCGGT GGCAAGAAGC CCTACCGCCA GAAGGGCACC
GGCCGCGCCC GCCAGGGTTC GACCCGCGCT CCGCAGTTCG CCGGCGGCGG CGTCGTGCAC
GGCCCCGTGC CGCGCGACTA CGCCCAGCGC ACCCCGAAGA AGATGAAGGC CGCCGCCCTG
CGCGGTGCCC TGTCGGACCG GGCGCGTGAC GGCCGCGTGA TCGTGGTGGA CGCCCTGGTC
GAGGGTGCGA CCCCGAACAC GAAGTCCGCG GTGGCTCTGC TCAAGGGTGT GACCGAGCAC
AAGAACGTGC TGGTCGTCCT GCAGCGCACC GACGAGGTCT CCTACAAGAG CCTCCGCAAC
GTCCCGACCG TGCACCTGAT CGACGTCGGC CAGCTGAACA CCTACGACGT GCTCGTCAAC
GACGCCGTCG TGTTCACGCA GGGCGCGTAC GACCAGTTCG TGGCCGGTCC CGCTAAGGGG
AAGTCGGCCA CCGCGGTGGC GTCCTCCCTC GAGGTTGAGG GGAGCGACGC GTGA
 
Protein sequence
MTQVVSVDLP GEIFDVQTNI PLIHQVVVAQ LAAARQGTHK TKTRGEVSGG GKKPYRQKGT 
GRARQGSTRA PQFAGGGVVH GPVPRDYAQR TPKKMKAAAL RGALSDRARD GRVIVVDALV
EGATPNTKSA VALLKGVTEH KNVLVVLQRT DEVSYKSLRN VPTVHLIDVG QLNTYDVLVN
DAVVFTQGAY DQFVAGPAKG KSATAVASSL EVEGSDA