Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0932 |
Symbol | |
ID | 8332266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1082644 |
End bp | 1083297 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644954085 |
Product | ribosomal protein L4/L1e |
Protein accession | YP_003111705 |
Protein GI | 256390141 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.106023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGG TTGTCTCCGT CGACCTCCCC GGCGAGATCT TCGACGTCCA GACCAACATC CCGCTGATCC ACCAGGTCGT GGTGGCCCAG CTGGCGGCGG CCCGTCAGGG CACGCACAAG ACCAAGACCC GGGGCGAGGT GTCCGGCGGT GGCAAGAAGC CCTACCGCCA GAAGGGCACC GGCCGCGCCC GCCAGGGTTC GACCCGCGCT CCGCAGTTCG CCGGCGGCGG CGTCGTGCAC GGCCCCGTGC CGCGCGACTA CGCCCAGCGC ACCCCGAAGA AGATGAAGGC CGCCGCCCTG CGCGGTGCCC TGTCGGACCG GGCGCGTGAC GGCCGCGTGA TCGTGGTGGA CGCCCTGGTC GAGGGTGCGA CCCCGAACAC GAAGTCCGCG GTGGCTCTGC TCAAGGGTGT GACCGAGCAC AAGAACGTGC TGGTCGTCCT GCAGCGCACC GACGAGGTCT CCTACAAGAG CCTCCGCAAC GTCCCGACCG TGCACCTGAT CGACGTCGGC CAGCTGAACA CCTACGACGT GCTCGTCAAC GACGCCGTCG TGTTCACGCA GGGCGCGTAC GACCAGTTCG TGGCCGGTCC CGCTAAGGGG AAGTCGGCCA CCGCGGTGGC GTCCTCCCTC GAGGTTGAGG GGAGCGACGC GTGA
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Protein sequence | MTQVVSVDLP GEIFDVQTNI PLIHQVVVAQ LAAARQGTHK TKTRGEVSGG GKKPYRQKGT GRARQGSTRA PQFAGGGVVH GPVPRDYAQR TPKKMKAAAL RGALSDRARD GRVIVVDALV EGATPNTKSA VALLKGVTEH KNVLVVLQRT DEVSYKSLRN VPTVHLIDVG QLNTYDVLVN DAVVFTQGAY DQFVAGPAKG KSATAVASSL EVEGSDA
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