Gene Caci_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0926 
Symbol 
ID8332260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1078105 
End bp1078728 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content69% 
IMG OID644954079 
Producthypothetical protein 
Protein accessionYP_003111699 
Protein GI256390135 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.437058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGAGA GCTTGAGCGG GCTGGCTGCT GCCGCGCAGT CTGGCGCGCG CGAGTTTGGG 
GAGCGCGGGT CTGGCGGGCG CGAATCTGGG GAGCGCGAGT CTGGTGGAGG GGACCAGGGC
TCGCGCGAGT TCTCCGCGCA GGACCTCACT TCGCGCTGGC TGACAGTGGA GCAAGTGCTC
GGCAGGCGGA TCGGCCAAGC CAGTGCTCTG TCTGCTGTCG AGCCCGCCTT CCCTGCTCTC
GACCTCGTCG CCGCCGATAC CGCTGTCGCT TCGCGGTGGT TCACTGCGGA TCCGGCGCCT
GGCAAGCTCG CCGGGCGCAC GGTGGTCCTG CCGTTCGTCG CGGTGGCGGA GTTGGCGACC
TGGCCCGAGC GGCTGCTTTG GGGTCATTCG CGGACCGAGG ACTTGAGCCT GTGGGCTGAT
CGGCGGCGCA TGATCCTCGG CGATGACACG GTCTGCCGTA TCTGGGCTCG CATCACCGTC
GCTGCGCAGC GTGCCGGGAG TCCGCCGCCT GCGAATGATT CCTGGATCGC CGCCGGCTGT
CTCTCCTATG GGCTGCCGCT CGCCACTCAG GACAAGCGAC ATTACCGGTA CTTCGCCGAC
CGGTATGGCC TGCAGCTGCT TTGA
 
Protein sequence
MGESLSGLAA AAQSGAREFG ERGSGGRESG ERESGGGDQG SREFSAQDLT SRWLTVEQVL 
GRRIGQASAL SAVEPAFPAL DLVAADTAVA SRWFTADPAP GKLAGRTVVL PFVAVAELAT
WPERLLWGHS RTEDLSLWAD RRRMILGDDT VCRIWARITV AAQRAGSPPP ANDSWIAAGC
LSYGLPLATQ DKRHYRYFAD RYGLQLL