Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0926 |
Symbol | |
ID | 8332260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1078105 |
End bp | 1078728 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644954079 |
Product | hypothetical protein |
Protein accession | YP_003111699 |
Protein GI | 256390135 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.437058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTGAGA GCTTGAGCGG GCTGGCTGCT GCCGCGCAGT CTGGCGCGCG CGAGTTTGGG GAGCGCGGGT CTGGCGGGCG CGAATCTGGG GAGCGCGAGT CTGGTGGAGG GGACCAGGGC TCGCGCGAGT TCTCCGCGCA GGACCTCACT TCGCGCTGGC TGACAGTGGA GCAAGTGCTC GGCAGGCGGA TCGGCCAAGC CAGTGCTCTG TCTGCTGTCG AGCCCGCCTT CCCTGCTCTC GACCTCGTCG CCGCCGATAC CGCTGTCGCT TCGCGGTGGT TCACTGCGGA TCCGGCGCCT GGCAAGCTCG CCGGGCGCAC GGTGGTCCTG CCGTTCGTCG CGGTGGCGGA GTTGGCGACC TGGCCCGAGC GGCTGCTTTG GGGTCATTCG CGGACCGAGG ACTTGAGCCT GTGGGCTGAT CGGCGGCGCA TGATCCTCGG CGATGACACG GTCTGCCGTA TCTGGGCTCG CATCACCGTC GCTGCGCAGC GTGCCGGGAG TCCGCCGCCT GCGAATGATT CCTGGATCGC CGCCGGCTGT CTCTCCTATG GGCTGCCGCT CGCCACTCAG GACAAGCGAC ATTACCGGTA CTTCGCCGAC CGGTATGGCC TGCAGCTGCT TTGA
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Protein sequence | MGESLSGLAA AAQSGAREFG ERGSGGRESG ERESGGGDQG SREFSAQDLT SRWLTVEQVL GRRIGQASAL SAVEPAFPAL DLVAADTAVA SRWFTADPAP GKLAGRTVVL PFVAVAELAT WPERLLWGHS RTEDLSLWAD RRRMILGDDT VCRIWARITV AAQRAGSPPP ANDSWIAAGC LSYGLPLATQ DKRHYRYFAD RYGLQLL
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