| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0891 |
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| Symbol | |
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| ID | 8332222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1037624 |
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| End bp | 1038940 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644954042 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003111665 |
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| Protein GI | 256390101 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0493428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGCA CCACCGGCCG GGGCCCCCGG CTTCTCGCGA TAGCCACCGC AGCCGTTCTC
ACGGTCGGCG TCAGCGCGTG TTCCAGCAGC AAGAGCAGCT CCTCGGCCGT CGGCGGCGCC
GGCAAGTCCG GCGGCAGCTT CACGTACTGG TCGATGTGGC GTCAGGACGA GCCGCAGGCC
AAGGTCATCC AGGCGGCGAT CACCCAGTTC ACCGCCGACA CCGGCATCAA GGTCGACGTC
GAGTGGACCG GCCGGGACGT CGCCAAGAAG ATCGGCCCGG CGATGGCCGC GGGCAAGGCG
CCGGACATGT GGGACGAGGG CGCGGACGTC ATCTACGGCG CCACCGCGCA GAACGGCAAC
GCCAAGGACC TCTCGGCGGT CCTGGACATG ACCATCCCGA CCGACAACGA GAAAGTCTCC
GACGCGATCC CGTCGAAGTA CTGGGACTCG CTGCCGAAGG ACCCCAACGG CGGCCAGCAC
TGGGTGATCC CCTACGAGGC CAGCACCGCG GGCATCTTCT ACAACACCGC CGACCCGACC
GTCTCCGCGG CGATGGCCTC GCAGCCGTCC ACCTGGGACG CGTTCATGCA GGTCTGCGCG
ACTCTGAAGA CGAAGAGCGA GCCCTGTCTT GCCTCCGAGG GCGAAGACCC CTGGACCAAC
GGTCTGTGGT TCGACTACCT GATCAACGCA GGCGGCGTGA ACTTCAACGA CCTGGCGAAC
GACAAGACCG GCGCCAGCTG GGACAACCCG GCCGTGCTGA AGGCGGCGAC ACAGGTCGAG
CAGCTCGTCA AGGGCGGCTA CATCATCCCG ACCTACACCG CCACGAAGTA CCCGGCGCAG
CAGACCAACT GGGCCGGCGG CAAGGCCGGC TTCCTGATGA ACGGCAACTG GGTCACCGCC
GAGGTCGCCA AGCAGATCCC GGCGACCTGG AAGTACGGCT TCATGCTCCC GCCGGGCGCG
ACCCAGCCGG ACTCGATGGT CTTCGGCTTC GCCCTGACCA AGAACGCCAA GAACGTCAGC
CAGGCCGAGC AGTTCATGGC CTACTTCCTG CAGAAGAAGA CGCTCTCGGG CATCTCCACC
GAGGCCGGCA ACATCACGCC GCGCACCGAC ATCCCGGCGC CGGCGGAGCT GGCCGACGTG
CAGAAGACCC TGAACGCGCC CAAGCTGCGC CTCACCTTCG ACGGCGTGGC CGGGGACTGG
ACCACCAAGG TCTGGAACCA GAACTACCTG GACTTCTGGC ACGGCAAGAT CGACGCCGCG
ACCTTCGTGG CGAAGATGAA GTCCGCGCAG GTCTCGTTCT GGAAGAGCCA GAGCTGA
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| Protein sequence | MGSTTGRGPR LLAIATAAVL TVGVSACSSS KSSSSAVGGA GKSGGSFTYW SMWRQDEPQA
KVIQAAITQF TADTGIKVDV EWTGRDVAKK IGPAMAAGKA PDMWDEGADV IYGATAQNGN
AKDLSAVLDM TIPTDNEKVS DAIPSKYWDS LPKDPNGGQH WVIPYEASTA GIFYNTADPT
VSAAMASQPS TWDAFMQVCA TLKTKSEPCL ASEGEDPWTN GLWFDYLINA GGVNFNDLAN
DKTGASWDNP AVLKAATQVE QLVKGGYIIP TYTATKYPAQ QTNWAGGKAG FLMNGNWVTA
EVAKQIPATW KYGFMLPPGA TQPDSMVFGF ALTKNAKNVS QAEQFMAYFL QKKTLSGIST
EAGNITPRTD IPAPAELADV QKTLNAPKLR LTFDGVAGDW TTKVWNQNYL DFWHGKIDAA
TFVAKMKSAQ VSFWKSQS
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