| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0769 |
|---|
| Symbol | |
|---|
| ID | 8332099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 899054 |
|---|
| End bp | 899824 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644953921 |
|---|
| Product | succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| Protein accession | YP_003111545 |
|---|
| Protein GI | 256389981 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.1011 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTG CCGTAGAAGA GCACGTCGAG ACCTCGGCCT CCGGCAAGGC CGGCATCCCA
ATGATGACCA TCACGGTCCG CATCCGGCGC TACAACCCGG AAGTGGACGC CGCGCCGCAC
TGGGTGGACT ACCAGGTCAC CGCGGACCCG ACGGCGCGCA TCCTGGACTC GCTGCACAAG
ATCAAGTGGG AGCAGGACGG CTCGCTGACC TTCCGCCGCT CCTGCGCGCA CGGCGTCTGC
GGCTCGGACG CGATGCGGAT CAACGGCAAG AACCGGCTGG CGTGCAAGGC CCTGGTGAAG
GACCTGAACC CGACAAGTGC GATCACCGTC GAGCCGATCC AGGGCCTGCC GGTGCTCAAG
GACCTCGTGG TCGACATGGA GCCGTTCTTC CAGGCCTACC GCGACGTCAA GCCGTTCCTG
ATCGCGCACG GCAACGAGCC CACGCGCGAG CGGATCCAGT CGCAGAAGGA CCGCGACCGC
TTCGACGACA CCACCAAGTG CATCCTGTGC GCGGCGTGCA CCACGTCGTG CCCGGTGTTC
TGGACCGACG GGCAGTACTT CGGCCCGGCG GCGATCGTCA ACGCGCACCG GTTCATCTTC
GACTCCCGCG ACGACGGGGC GAACGAGCGC CTGGAGATCC TGAACGACCG CGAGGGCGTG
TGGCGCTGCC GGACCACGTT CAACTGCACC GAGGCGTGCC CGCGCGGAAT CCAGATCACG
CAGGCCATCG CCGAGGTGAA GCGCGCGCTG ATCACGCGCA GGGTCATCTG A
|
|---|
| Protein sequence | MSTAVEEHVE TSASGKAGIP MMTITVRIRR YNPEVDAAPH WVDYQVTADP TARILDSLHK
IKWEQDGSLT FRRSCAHGVC GSDAMRINGK NRLACKALVK DLNPTSAITV EPIQGLPVLK
DLVVDMEPFF QAYRDVKPFL IAHGNEPTRE RIQSQKDRDR FDDTTKCILC AACTTSCPVF
WTDGQYFGPA AIVNAHRFIF DSRDDGANER LEILNDREGV WRCRTTFNCT EACPRGIQIT
QAIAEVKRAL ITRRVI
|
|---|
| |