Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0710 |
Symbol | |
ID | 8332040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 828742 |
End bp | 829386 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953862 |
Product | protein of unknown function DUF1707 |
Protein accession | YP_003111486 |
Protein GI | 256389922 |
COG category | [S] Function unknown |
COG ID | [COG4758] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.537634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.113725 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGCAG CCTTTCCGGC CAACGATCCC CACGGAACCA TGCGCGCCTC CGACGCCGAC CGGGACCGCG TGGCGGACGC CCTCCGGGAG GCTTACGCCG AGGGCCGCCT GGACGCCGAC GAACACAACG AGCGCATCGA CCTCGCTTAC AAGGCCAAGA CCCTCGGCGA GCTGTCGCCG CTGGTGTCCG ACCTGCCGCA GCGCCACATC ACCTCTCCCG CCGGCGCGCC CCCCTCGGTC CCGGCGATGC CCGCGGACTA CGCCCCGGGA TCGAAGATCA CTGCCGTCTT CGCCGAGCAG AAGCGCGGCG GACGCTGGCT TGTCCCCTCG CAGACCATCG CCGCGGCCGT CTTCGGCTCG GTGACCATCG ACCTGCGCGA GGCCGTGCTG ACCCAGCGCG AAGTGGTCAT CACCGCCAAC GCGGTGTTCG GCTCCATCGA GATCAAGGTG CCGCACGGCG TCGTGGTGCG CGACGAGGGC ACCGCGGTGT TCGGCTCGCG CAGCGGCTCG GACCGCAACG CCGCCGGCGA CGTGCCGATC ACGCCGGAGT CGCCGGTCGT GGTGCTGCGC GGGATGGCGC TGTTCGGCGA GGTGTCGGTG CGGTATCCCA AGCCGAAGAA GCTGGGCAAG TTCCTCGGGC GCTGA
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Protein sequence | MPAAFPANDP HGTMRASDAD RDRVADALRE AYAEGRLDAD EHNERIDLAY KAKTLGELSP LVSDLPQRHI TSPAGAPPSV PAMPADYAPG SKITAVFAEQ KRGGRWLVPS QTIAAAVFGS VTIDLREAVL TQREVVITAN AVFGSIEIKV PHGVVVRDEG TAVFGSRSGS DRNAAGDVPI TPESPVVVLR GMALFGEVSV RYPKPKKLGK FLGR
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