Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0697 |
Symbol | |
ID | 8332027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 814562 |
End bp | 816550 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644953849 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_003111473 |
Protein GI | 256389909 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCCTC CCGAAACGGC GCATACGGTG AGCGACGCCG ACGACGTCCT GCGGCGTGTC TTCGGCTACG ACTCGTTCCG CGGGGCGCAG CAAGAGATCG TGGAACATGT CATCGGCGGC GGGGACGCGC TGGTGCTGAT GGCGACCGGC GGCGGCAAGT CGCTGTGCTA CCAGATCCCG GCGTTGGTGC GGCCCGGGGT CGGGGTGGTC GTCTCGCCGC TGATCGCGCT GATGCAGGAC CAGGTCGACG CGCTGACCGC GGTGGGTGTG CGGGCCGGGT TCCTGAACTC CACGCAGGAC CCCGACCAAC GCCGGTTCGT GGAGCAGATG TTCCTCGCCG GCGAGCTCGA CCTGCTCTAC CTCGCGCCGG AGCGGCTGCG CTCGGAGTCC ACGCTGCAGC TGTTGGACCG CGGCAAGATC TCGCTGTTCG CGATCGACGA GGCGCACTGC GTCTCGCAGT GGGGTCACGA CTTCCGGCCG GACTACCTCA ACCTGTCGAT GCTGCACGAG CGCTGGCCCG ACGTGCCGCG CATCGCGCTC ACCGCGACCG CCACGCGGGC CACGCACCAG GAGATCGCCG AGCGCCTGAA CCTGGGCGGC GCCAAGCACT TCGTCGCCGG CTTCGACCGG CCGAACATCC AGTACCGCAT CGTGCCGAAG GCGGAGCCGA ACAAGCAGCT GCTGGAGCTG TTGCGGACCG AGCACCCCGG CGACGCGGGC ATCGTCTACT GCCTGTCGCG CGCCTCCACC GAGAAAACCG CGCAGTTCCT GGCGAACAAC GGCATCACGG CGCTGGCCTA CCACGCCGGT CTGGACGCCG CGACGCGCGC GAGGACGCAG TCCCGCTTCC TGCGCGAGGA CGGCTTGGTC ATCGTCGCCA CCATCGCCTT CGGCATGGGC ATCGACAAGC CGGACGTCCG CTTCGTCGCG CACCTGGACC TGCCGAAGTC GGTCGAGGGC TACTACCAGG AGACCGGCCG CGCCGGGCGC GACGGCCTGC CCTCGACCGC GTGGCTGGCG TACGGGCTGC AGGACGTCGT CCAGCAGCGC AAGATGATCG CCTCCTCCGA CGGCGACGAC GCCTACCGCC GCCAGCTCAC CGCGCACCTG GACGCCATGC TGGCGCTCTG CGAGACCATC GAGTGCCGCC GGGTCCAGCT GCTGAACTAC TTCGGCCAGC CCGGCGAGCC CTGCGGCAAC TGCGACACCT GCCTGAACCC GCCGCAGTCC TGGGACGGCA CGGTCCCGGC GCAGAAGCTG CTGTCCACGG TCTTCCGCCT CAAGAGCGAG CGGCGCCAGC GCTTCGGCGC CGGGCAGTCC ATCGACATCC TGCTCGGCAA GCAGACGCCG AAGGTCACCC AGTTCACCCA CGACCAGCTG AGCGTCTTCG GCATCGGCAC CGAGCTGTCC GAAGGCGAGT GGCGCGGCGT CGTGCGGCAG CTGCTCGCGC AGGGCCTGCT GATGGTCGAG GGCGACTACA GCACACTGGC GCTGACCGAG GCCAGCGGCG CGGTCCTGCG CGGCGATCGC AAGGTCCTGA TGCGGCGCGA GCCGGAGCGG CCGGCACGCG CACCGAAGCA GTCGCGGCAG TCGGCGGCAG CGACCGAGGA CCTGCCGGAG GAGGCCAAGC CGGTCTTCGA GAAGCTCCGC GCATGGCGCG GCGCGACGGC CAAGGAGCAG GGCGTCCCGG CATACGTCAT CTTCCACGAC GCGACGCTGC GCCAGATCGC CACCCAGGCG CCGACCTCCC TGCAGCAACT CGGCACGATC AGCGGCGTCG GGGAGAACAA GCTCGCCAAA TACGGCCAAC CGATCCTGGA CGCCCTCGCC GAGATCCTCG ACCGGCCCGA CCAGCCGGAA CACTCCGAAC GTCCGGAACG TCCGGAACGC CCCGCGCCCG AGGAGCCGCC GGCCGAGCTC GACTTCGAGG AGCCCCCGGA GTACCCGGAC GAGGAGTACG GGTACCCCGA TGAGGAGTAC GCCGGGTAA
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Protein sequence | MAPPETAHTV SDADDVLRRV FGYDSFRGAQ QEIVEHVIGG GDALVLMATG GGKSLCYQIP ALVRPGVGVV VSPLIALMQD QVDALTAVGV RAGFLNSTQD PDQRRFVEQM FLAGELDLLY LAPERLRSES TLQLLDRGKI SLFAIDEAHC VSQWGHDFRP DYLNLSMLHE RWPDVPRIAL TATATRATHQ EIAERLNLGG AKHFVAGFDR PNIQYRIVPK AEPNKQLLEL LRTEHPGDAG IVYCLSRAST EKTAQFLANN GITALAYHAG LDAATRARTQ SRFLREDGLV IVATIAFGMG IDKPDVRFVA HLDLPKSVEG YYQETGRAGR DGLPSTAWLA YGLQDVVQQR KMIASSDGDD AYRRQLTAHL DAMLALCETI ECRRVQLLNY FGQPGEPCGN CDTCLNPPQS WDGTVPAQKL LSTVFRLKSE RRQRFGAGQS IDILLGKQTP KVTQFTHDQL SVFGIGTELS EGEWRGVVRQ LLAQGLLMVE GDYSTLALTE ASGAVLRGDR KVLMRREPER PARAPKQSRQ SAAATEDLPE EAKPVFEKLR AWRGATAKEQ GVPAYVIFHD ATLRQIATQA PTSLQQLGTI SGVGENKLAK YGQPILDALA EILDRPDQPE HSERPERPER PAPEEPPAEL DFEEPPEYPD EEYGYPDEEY AG
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