Gene Caci_0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0658 
Symbol 
ID8331988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp763036 
End bp764199 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content72% 
IMG OID644953811 
Productcystathionine gamma-synthase 
Protein accessionYP_003111435 
Protein GI256389871 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAT CTGACGCCCA CGCCAACGCC GCCTTCGAGA CCCTGGCCAT CCATGCCGGC 
CAGGACCCGG ACCCGCTGAC CGGCGCCGTC GTCCCCCCGA TCTACCAGGT CTCCACCTAC
AAACAGGATG GAGTCGGCGG CCTGCGGGGC GGCTACGAGT ACTCACGCAG CGCCAATCCG
ACCCGCAAGG CGCTGGAAGA CTGTCTGGCC GCCATCGAGG GCGGCCGTGT CGGCCTCGCC
TTCGCCTCGG GTCTGGCCGC TGAGGACTGC CTGCTGCGGA CCGTGTGTGT GCCCGGCGAC
CACGTCGTCA TCCCGGCCGA CGCCTACGGC GGCACCTTCC GCCTGTTCTC CAAGGTCCTG
TCGCGGTGGG GTCTGGGCTG GACCGCCGCC AACATGGCGG ACCCGGCTGC CGTGCGGGCC
GCCGTCGTGC CGGGCAAGAC CAAGGCGATC TGGGTCGAGA CCCCCTCCAA CCCGCTGTTG
GGCGTCGCGG ACATCGCCGC GCTGGCCGGG GTCGCGCACG AGACCGGCTC GCTGCTGGTC
GTCGACAACA CGTTCGCCAC GCCCTACCTG CAGCAGCCGC TGGCGCTCGG CGCCGACGTG
ATCGTGCACT CCACCACCAA GTACATGGGC GGCCACTCCG ACGTGGTCGG CGGCGCCCTG
GTGGTGTCCG ACGAGGAACT CGGCGCGGAG CTGACCTACC ACCAGAACGC GATGGGCGCC
GTCGCCGGCC CGTTCGACGC CTGGCTGGTG CTGCGCGGCA TCAAGACCCT GGCGGTGCGC
ATGGACCGGC ACTGCTCCAA CGCGCAGCGC ATCGCCGAGG CGCTGGCCGC GCACCCGAAG
GTCACCGCCG TCCACTACCC GGGCCTGCCC GACGACCCCG GCCACGAGGT CGCCGCCAAG
CAGATGGCCG GTTTCGGCGG GATGGTCTCC TTCCGGGTGG CCGGCGGCGA GCAGGAGGCG
GTCGACGTGT GCGGCCGCAC CGAGCTGTTC ATCCTCGGCG AGTCGCTCGG CGGCGTCGAG
TCGCTGATCG AGCACCCCGG CCGGATGACC CACGCCAGCG CCGCCGGCTC GCCGCTGGAG
GTCCCGGACG ACCTCATCCG GCTCTCGGTC GGCATCGAGT CGATCGACGA CCTGCTGGCC
GACCTCCTGC GGGCGCTGGG CTGA
 
Protein sequence
MSASDAHANA AFETLAIHAG QDPDPLTGAV VPPIYQVSTY KQDGVGGLRG GYEYSRSANP 
TRKALEDCLA AIEGGRVGLA FASGLAAEDC LLRTVCVPGD HVVIPADAYG GTFRLFSKVL
SRWGLGWTAA NMADPAAVRA AVVPGKTKAI WVETPSNPLL GVADIAALAG VAHETGSLLV
VDNTFATPYL QQPLALGADV IVHSTTKYMG GHSDVVGGAL VVSDEELGAE LTYHQNAMGA
VAGPFDAWLV LRGIKTLAVR MDRHCSNAQR IAEALAAHPK VTAVHYPGLP DDPGHEVAAK
QMAGFGGMVS FRVAGGEQEA VDVCGRTELF ILGESLGGVE SLIEHPGRMT HASAAGSPLE
VPDDLIRLSV GIESIDDLLA DLLRALG