| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0633 |
|---|
| Symbol | |
|---|
| ID | 8331962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 737780 |
|---|
| End bp | 738667 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644953785 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003111410 |
|---|
| Protein GI | 256389846 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.252559 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAGCA CCGAATGGCT CGCCGAGCGC TTCGAGGAGA ACCGGCGCCA TCTGCGAGCG
GTCGCGTTCC GCATGCTGGG CTCCCTGTCC GAGGCGGACG ACGCCGTCCA GGAGTCCTGG
CTGCGCCTGA GCCGCCAGCG CGAGGAGCGC CTCACCGCCA TCGACAACCT GACCGGCTGG
CTCACCACGG TCGTGGCACG CGTGGCGCTG ACCATGCTGA AGACCCGCAG CCGCGAGGAG
TCGTTGGACG CGGTCCACAT CCCGGAACCG ATCATCTCGC CGGAGGACGG TCTGGACCCC
GAGCACGAGG CGCTGCTCGC CGATTCGGTC GGACTGGCCC TGCTCGTGGT CCTGGAGACG
CTGCAACCGG CCGAGCGCCT GGCGTTCGTG CTGCACGACA TGTTCGCCGT CCCCTTCGAG
GACATCGCGG TCATCGTCGA CAAGAGCCCG GCCGCCGCCC GGCAGCTCGC CAGCCGGGCC
CGGCGCCGGG TGCAGGGCGC CGACGCCGTG CCCGACCCGG ATCTGGGCCG GCAGCGCGCG
GTGGTGAAGG CGTTCACCGC GGCCTCGCGC GGCGGCGACC TCGCCGCGCT GGTCGCGGTC
CTGGATCCGG ACGTCGTGCT GCGCGCCGAC TACGGCAGCC TGCCCGCCGG CCTGAAGCTG
CTGCGCGGCG CCGAGGCGGT CGCCAAGCAG GCGCTGATGT TCGCGCAGTT CGCGGCGCAC
GCGCACCCGG CGCTCGTCAA CGGGGCGCCG GGGCGGGTCA CGATCGTCGA CGGCAAGCCC
GCGGCGGTCA TGGGATTCAC CGTGGTGGAC GACCGGATCA AGGAGATCAA CATCCTCGCG
GACCCGGAGC GGCTGTCCGA GCTGGATCTG ACCATCTTCG AGGCCTGA
|
|---|
| Protein sequence | MESTEWLAER FEENRRHLRA VAFRMLGSLS EADDAVQESW LRLSRQREER LTAIDNLTGW
LTTVVARVAL TMLKTRSREE SLDAVHIPEP IISPEDGLDP EHEALLADSV GLALLVVLET
LQPAERLAFV LHDMFAVPFE DIAVIVDKSP AAARQLASRA RRRVQGADAV PDPDLGRQRA
VVKAFTAASR GGDLAALVAV LDPDVVLRAD YGSLPAGLKL LRGAEAVAKQ ALMFAQFAAH
AHPALVNGAP GRVTIVDGKP AAVMGFTVVD DRIKEINILA DPERLSELDL TIFEA
|
|---|
| |