Gene Caci_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0611 
Symbol 
ID8331940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp713041 
End bp713802 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content74% 
IMG OID644953763 
ProductNmrA family protein 
Protein accessionYP_003111388 
Protein GI256389824 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.465508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG CCGTCGCCGG CGCCACCGGC AACATCGGAA CCCGCACTGT CGCGGCGCTG 
GAGCGCGCCG GGCACGACGT GGTGGGGATC AGCCGCAAGC AGGGTGTGGA CCTGATCAGC
GGCGCCGGGC TGGAGGAGGC GCTGGCCGGC GTGGACGCCG TCGTCGACGC CACCAACGGG
CCCGTCGGCT CGCTGGAGGA GACCGTCGCC TGGTTCGGCG GCGCGACCGC GAACCTGCTG
GCCGCCGAGG AGCGCGCCGG GGTGCGGCAT CACGTGCTGC TGTCGATCGT CGGCGTGCAC
CGCGTGGAGG GCAACGCCCA CTACGCCGGC AAGCGCGAGC AGGAGCGGCT GGTCCAGGCG
GGCAACGTCC CGTGGACGAT CGTGCCGGCC ACCCAGTTCC ACGACTTCCC GGCGATGGTC
GCCGGCTGGG TCACGCAGGA CGGCGTCGCG CCGATCGCCC CGCTGCTGCT GCAGCCGATC
GCACCGGCGG ACGTCGCCGA CGTGCTCGCG ATGGTCGCCG TCGGAACGCC CCAGGGCCGG
TTCGCCGACG TCGCCGGGCC GGACCCGCAG GACATGGTCG ACCTGGCGCG CCGGACCCTC
GAGGCGCGTG GCGAGACGGT CAAGCTGGTG CCGACGTGGG ACGGCGGGCT GTTCGGCGTC
GCGCTGGCCG GGAACGTGAT GCTGCCCGGC GAGGGCGCGC ACATCACGCC GATGACGTTC
GAGGCTTGGC TGGAGCAGGA GCGCGAAGCC GCCGGACGGT AG
 
Protein sequence
MRIAVAGATG NIGTRTVAAL ERAGHDVVGI SRKQGVDLIS GAGLEEALAG VDAVVDATNG 
PVGSLEETVA WFGGATANLL AAEERAGVRH HVLLSIVGVH RVEGNAHYAG KREQERLVQA
GNVPWTIVPA TQFHDFPAMV AGWVTQDGVA PIAPLLLQPI APADVADVLA MVAVGTPQGR
FADVAGPDPQ DMVDLARRTL EARGETVKLV PTWDGGLFGV ALAGNVMLPG EGAHITPMTF
EAWLEQEREA AGR