Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0611 |
Symbol | |
ID | 8331940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 713041 |
End bp | 713802 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644953763 |
Product | NmrA family protein |
Protein accession | YP_003111388 |
Protein GI | 256389824 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.465508 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATCG CCGTCGCCGG CGCCACCGGC AACATCGGAA CCCGCACTGT CGCGGCGCTG GAGCGCGCCG GGCACGACGT GGTGGGGATC AGCCGCAAGC AGGGTGTGGA CCTGATCAGC GGCGCCGGGC TGGAGGAGGC GCTGGCCGGC GTGGACGCCG TCGTCGACGC CACCAACGGG CCCGTCGGCT CGCTGGAGGA GACCGTCGCC TGGTTCGGCG GCGCGACCGC GAACCTGCTG GCCGCCGAGG AGCGCGCCGG GGTGCGGCAT CACGTGCTGC TGTCGATCGT CGGCGTGCAC CGCGTGGAGG GCAACGCCCA CTACGCCGGC AAGCGCGAGC AGGAGCGGCT GGTCCAGGCG GGCAACGTCC CGTGGACGAT CGTGCCGGCC ACCCAGTTCC ACGACTTCCC GGCGATGGTC GCCGGCTGGG TCACGCAGGA CGGCGTCGCG CCGATCGCCC CGCTGCTGCT GCAGCCGATC GCACCGGCGG ACGTCGCCGA CGTGCTCGCG ATGGTCGCCG TCGGAACGCC CCAGGGCCGG TTCGCCGACG TCGCCGGGCC GGACCCGCAG GACATGGTCG ACCTGGCGCG CCGGACCCTC GAGGCGCGTG GCGAGACGGT CAAGCTGGTG CCGACGTGGG ACGGCGGGCT GTTCGGCGTC GCGCTGGCCG GGAACGTGAT GCTGCCCGGC GAGGGCGCGC ACATCACGCC GATGACGTTC GAGGCTTGGC TGGAGCAGGA GCGCGAAGCC GCCGGACGGT AG
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Protein sequence | MRIAVAGATG NIGTRTVAAL ERAGHDVVGI SRKQGVDLIS GAGLEEALAG VDAVVDATNG PVGSLEETVA WFGGATANLL AAEERAGVRH HVLLSIVGVH RVEGNAHYAG KREQERLVQA GNVPWTIVPA TQFHDFPAMV AGWVTQDGVA PIAPLLLQPI APADVADVLA MVAVGTPQGR FADVAGPDPQ DMVDLARRTL EARGETVKLV PTWDGGLFGV ALAGNVMLPG EGAHITPMTF EAWLEQEREA AGR
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