Gene Caci_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0601 
Symbol 
ID8331929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp697940 
End bp699109 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content70% 
IMG OID644953753 
ProductVWA containing CoxE family protein 
Protein accessionYP_003111379 
Protein GI256389815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCGG TTTCCCAGGA TCCTGAGACG GCCGCGGCGC TAGAGCGGTG GCGGATGATC 
CTCGGCGCGC CGGCGTCCGC GGGCATGCCG CTCAGCGACG GGAACGCTGC GCGCGACGCG
GCGTTGGACT GGCTGTACGG CCGGGACGAC GAGCTGGCGC GGCGCGGCGT CCGCAAGGGC
GGCGCGGCGG ACAGCGGCGG ACCGAAGGGC GCCGGCGGCA GCGCGGATTC GGTGCTCACC
ACCGTCGACT GGCTGGACGG GATCACGCGG CTGTTCCCGA AGGAGACCGT CGAGCGGCTG
ACCCGCGACG CCGTCGACCG GTATCAGATC CATGACATCG TCACCGACCC GAAGGTGCTG
GAGCGCGTCG AGCCGAGCCC GGCGCTGCTG AAGGCGGTGC TGCGGACCAA GCACCTGATG
GATCCGAAGG TGCTGGAGCT GGCGCGCAAG CTGGTCTCCG CGGTGATCGC CGAGCTGATG
CGCAAGCTGG CGACCGAGGT GCGCGTGTCG TTCTCCGGGA CCCGGCTGCG CCGTCCGTCG
CAGGTGCGGC TGGCGCGCAA CTTCGACGTG AAGCGCACCC TGCGCGGCAA CCTCGGCCAC
TACCAGCCGG AGGAGCGCAA GCTCTACATA GAGGACGCGC ACTTCTTCAC CCGCTCGCGC
CGCCACGTCG ACAACTGGCA GGTGATCCTG CTGGTCGACC AGTCGGGCTC GATGGTCTCG
TCGGTCATCC ACTCGGCGGT GACGGCCGCC TGCCTGTGGG GACTGCCGGG CGTGCGCACG
CACCTGGTCG CGTTCGACAC GTCGGTGGTG GACCTGACCA GCGACGTCAC CGACCCGGTG
GAATTGCTGA TGAAGGTCCA ACTCGGCGGC GGCACCGACA TCGCCAAGGC CGTGACCTAC
GCCGGCGACC TGGTCGCGAA CCCCCGCCGC ACCATCGTGG CCCTGATATC AGACCTCTAC
GAAGGCGGCA GCGAAACCAA CCTCCTGCGC GGCGCCCGCT CCCTGATCGA GCAAGGCTGC
CGCTTCCTAG CCCTGTGCGC CCTCGACGAG GAAGCCAACC CCGCCTTCAA CCGCGACCTG
GCCGAACGCC TCGCGACCCT CGGCGCCCAA GTCGGCGCCA TGACCCCCGG CGAACTCGCG
GCGTTCGTAG CGGAGGCAGT GAACTCATGA
 
Protein sequence
MNAVSQDPET AAALERWRMI LGAPASAGMP LSDGNAARDA ALDWLYGRDD ELARRGVRKG 
GAADSGGPKG AGGSADSVLT TVDWLDGITR LFPKETVERL TRDAVDRYQI HDIVTDPKVL
ERVEPSPALL KAVLRTKHLM DPKVLELARK LVSAVIAELM RKLATEVRVS FSGTRLRRPS
QVRLARNFDV KRTLRGNLGH YQPEERKLYI EDAHFFTRSR RHVDNWQVIL LVDQSGSMVS
SVIHSAVTAA CLWGLPGVRT HLVAFDTSVV DLTSDVTDPV ELLMKVQLGG GTDIAKAVTY
AGDLVANPRR TIVALISDLY EGGSETNLLR GARSLIEQGC RFLALCALDE EANPAFNRDL
AERLATLGAQ VGAMTPGELA AFVAEAVNS