Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0601 |
Symbol | |
ID | 8331929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 697940 |
End bp | 699109 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644953753 |
Product | VWA containing CoxE family protein |
Protein accession | YP_003111379 |
Protein GI | 256389815 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCGG TTTCCCAGGA TCCTGAGACG GCCGCGGCGC TAGAGCGGTG GCGGATGATC CTCGGCGCGC CGGCGTCCGC GGGCATGCCG CTCAGCGACG GGAACGCTGC GCGCGACGCG GCGTTGGACT GGCTGTACGG CCGGGACGAC GAGCTGGCGC GGCGCGGCGT CCGCAAGGGC GGCGCGGCGG ACAGCGGCGG ACCGAAGGGC GCCGGCGGCA GCGCGGATTC GGTGCTCACC ACCGTCGACT GGCTGGACGG GATCACGCGG CTGTTCCCGA AGGAGACCGT CGAGCGGCTG ACCCGCGACG CCGTCGACCG GTATCAGATC CATGACATCG TCACCGACCC GAAGGTGCTG GAGCGCGTCG AGCCGAGCCC GGCGCTGCTG AAGGCGGTGC TGCGGACCAA GCACCTGATG GATCCGAAGG TGCTGGAGCT GGCGCGCAAG CTGGTCTCCG CGGTGATCGC CGAGCTGATG CGCAAGCTGG CGACCGAGGT GCGCGTGTCG TTCTCCGGGA CCCGGCTGCG CCGTCCGTCG CAGGTGCGGC TGGCGCGCAA CTTCGACGTG AAGCGCACCC TGCGCGGCAA CCTCGGCCAC TACCAGCCGG AGGAGCGCAA GCTCTACATA GAGGACGCGC ACTTCTTCAC CCGCTCGCGC CGCCACGTCG ACAACTGGCA GGTGATCCTG CTGGTCGACC AGTCGGGCTC GATGGTCTCG TCGGTCATCC ACTCGGCGGT GACGGCCGCC TGCCTGTGGG GACTGCCGGG CGTGCGCACG CACCTGGTCG CGTTCGACAC GTCGGTGGTG GACCTGACCA GCGACGTCAC CGACCCGGTG GAATTGCTGA TGAAGGTCCA ACTCGGCGGC GGCACCGACA TCGCCAAGGC CGTGACCTAC GCCGGCGACC TGGTCGCGAA CCCCCGCCGC ACCATCGTGG CCCTGATATC AGACCTCTAC GAAGGCGGCA GCGAAACCAA CCTCCTGCGC GGCGCCCGCT CCCTGATCGA GCAAGGCTGC CGCTTCCTAG CCCTGTGCGC CCTCGACGAG GAAGCCAACC CCGCCTTCAA CCGCGACCTG GCCGAACGCC TCGCGACCCT CGGCGCCCAA GTCGGCGCCA TGACCCCCGG CGAACTCGCG GCGTTCGTAG CGGAGGCAGT GAACTCATGA
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Protein sequence | MNAVSQDPET AAALERWRMI LGAPASAGMP LSDGNAARDA ALDWLYGRDD ELARRGVRKG GAADSGGPKG AGGSADSVLT TVDWLDGITR LFPKETVERL TRDAVDRYQI HDIVTDPKVL ERVEPSPALL KAVLRTKHLM DPKVLELARK LVSAVIAELM RKLATEVRVS FSGTRLRRPS QVRLARNFDV KRTLRGNLGH YQPEERKLYI EDAHFFTRSR RHVDNWQVIL LVDQSGSMVS SVIHSAVTAA CLWGLPGVRT HLVAFDTSVV DLTSDVTDPV ELLMKVQLGG GTDIAKAVTY AGDLVANPRR TIVALISDLY EGGSETNLLR GARSLIEQGC RFLALCALDE EANPAFNRDL AERLATLGAQ VGAMTPGELA AFVAEAVNS
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