Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0551 |
Symbol | |
ID | 8331878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 636591 |
End bp | 637448 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644953703 |
Product | hypothetical protein |
Protein accession | YP_003111330 |
Protein GI | 256389766 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.190475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00503551 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAACC GGGTCCTGCT CGGCGCGGTC GCCTACGATT CGAAGGTCGT CACGATCTGG GACGGTTTCC GTCAGTGGTT CCGGGACCGC GACTTGGACT TCGATTACGT CCTGTACTCC CACTACGAGC GTCAGATTGA GGACCTGGTT GAGGGCCACA TCGATGTGGC GTGGCATTCG CCGTTGGCGT GGGTCCGGAC GGTGCGTCTC GCGCGGGCAC GGTCAGTCGG TGTGCGGGCC GTGGTGATGC GAGACAGTGA TCGGGATCTG GTATCGGCGG TCTTGGTCCG AGCCGACTCC GATCTCGCGT CGCTCGACGA TTTGCGCGGT CGGAGTGTGG CGACGGGAGC GATCGACTCT CCTCAAGCCC ATCTGCTGCC GTTGTCGATG CTCCGGGAGG CCGGGCTTCG CCCGGATGTC GACTTCAAGG TCTCGCGTTT CGACGTGCGG GTCGGGTTGC ACGGCGACCA CGTCGGCGGC GAGCGCGACG CGGCGGTGGC GCTGCGGTCC GGCCTGGTCG ACGCCGCATG CATGTTGGAT GCCAACACGT TGCTGTTCTC TCGGGAGGGA ACGCTGCCAG CGGGGTCGGT CAGGGTATTG GCGAAAACTG AGCCCTTCGA CCATTGCACC ATGGCGGTCG GTCCGGGTGC CGACAAGTCG ACGGTCGACC GATTCACGGC GCTCTTACTT GGCATGGCGT ACGACGATCC GACCGTTCGG CCACTGTTCG ACCTCGAGGG TCTCAAACAA TGGTTGCCCG CGCGGACGGA TCGGTACAGC GCCTTGGAAC GCGCGGTGGA CGAGTTGGGT TTCCTCGACG CTGAGGGGAA GCTGTGTGCT GACGATTATC GACCTTGA
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Protein sequence | MSNRVLLGAV AYDSKVVTIW DGFRQWFRDR DLDFDYVLYS HYERQIEDLV EGHIDVAWHS PLAWVRTVRL ARARSVGVRA VVMRDSDRDL VSAVLVRADS DLASLDDLRG RSVATGAIDS PQAHLLPLSM LREAGLRPDV DFKVSRFDVR VGLHGDHVGG ERDAAVALRS GLVDAACMLD ANTLLFSREG TLPAGSVRVL AKTEPFDHCT MAVGPGADKS TVDRFTALLL GMAYDDPTVR PLFDLEGLKQ WLPARTDRYS ALERAVDELG FLDAEGKLCA DDYRP
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