Gene Caci_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0528 
Symbol 
ID8331855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp613035 
End bp613835 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content70% 
IMG OID644953685 
Productprotein of unknown function DUF574 
Protein accessionYP_003111312 
Protein GI256389748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.253629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0886939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGGG CCCCGGACTG GATCACCGCC GACGCGGACA CCGAACGCCC CAGCATCGCG 
CGCTTCTACG ACTACCTCCT CGGCGGGACG CACCACCTCG AGGTCGACCG CGAGCTCGGC
CGCAAGGCCA TCCGCGCGGC GCCCGGCCTC ATCCTGCTGA TGCGGGAGAA CCGCAAGTTC
CTGCGGCGGG CGGTCAAGTG CGCCCTGGAC GCCGGGATCG ACCAGTTCCT CGACATCGGC
TCGGGCATCC CGGCCCGCGG CAGCATCCAC GAGACCGCGC GCAAGGCCGG CTCGCGGGCC
CGGGTGGCCT ACGTCGATAT CGACCCGGTG GCCGTGTCGG AGGGCAAGGC GATCCTCGCC
GGCGACCCGG AGGGTGTCAG CGTGCTGGGA GACGTCTTCG AGCCCGCGGC CATCCTGGAG
AACCCGGAGG TGCGCGCCCT GATCGACCTG GACCGCCCGG TCGTGCTGCT GATCCTCAAT
GTGATCCATT TCTTCCCGGA CTCCAAGGTG CTTCCCGTGC TGGAGACGTA CCGGCACCGC
CTGGTGTCGG GAAGCATGCT CGGCCTGTCG GTGGCCATGG ACGGCACCAC CGGCGCCGAG
GCGATCGACG AGCTCTACCG GCAGGAGTAC GAGGGGTTCA CCCTGCGGTC CCGCGAGCAG
ATCGAGGCGC TGTTCGGCGA CTTCGAGCTG CTCGAGCCCG GAGTGGTCTA TCCGCCGGAG
TGGCGGCCCG AGGACCCGGG CCGGACGGTG GTGAACCCGG AGCGGTACAG CTCGTTGGTC
GGCGTCGCCA GGAAGCGGTG A
 
Protein sequence
MNGAPDWITA DADTERPSIA RFYDYLLGGT HHLEVDRELG RKAIRAAPGL ILLMRENRKF 
LRRAVKCALD AGIDQFLDIG SGIPARGSIH ETARKAGSRA RVAYVDIDPV AVSEGKAILA
GDPEGVSVLG DVFEPAAILE NPEVRALIDL DRPVVLLILN VIHFFPDSKV LPVLETYRHR
LVSGSMLGLS VAMDGTTGAE AIDELYRQEY EGFTLRSREQ IEALFGDFEL LEPGVVYPPE
WRPEDPGRTV VNPERYSSLV GVARKR